Gene Information

Name : Ccel_2116 (Ccel_2116)
Accession : YP_002506441.1
Strain : Clostridium cellulolyticum H10
Genome accession: NC_011898
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2478696 - 2481041 bp
Length : 2346 bp
Strand : -
Note : PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: ATPase AAA; KEGG: cth:Cthe_0312 ATPase AAA-2

DNA sequence :
ATGATAAAATGCTCCATTTGCAATAAAAACATCGCAGTTGTCTTTGTAACAAAAATCATAGACGGAAAACAGATTCAGGA
GGGCTTATGCGTAAGCTGTGCAAAAAAACAAAATTTACAGCCAATAGATCAATTACTGTCACAAACCGGAATGACAGAAT
ATGAGCTTGAAAATATAAGCAAACAAGTAGGAGATATGCTTGAAGAGATGGATGGGTCTGAAATAATGGAGGCAATGCAG
GTAGACCCTGAAAATATTAATCAGGCAAATCCCTTTTTCAGTATATTGAATAAGGCATTTCCAAAGACAGGTGATTCAGA
GTTAAACAATTCAAATAAAAACATTCAACCAGTCGGTCAGGATAAAAATGGGGAAGATAAGGATAGGAATTATACAAAAA
CCAAAGCTCAGGACAAAAAGAATGTTAAAAAGAAAAAATATCTCGAAATGTATGGGACAAACCTTATAGATAAGGCCAAA
GAAGGTAGCATAGATAATATCATAGGCAGAACTCGTGAGATAGAAAGAGTAATTCAAATTTTGAATCGAAGAACAAAAAA
TAATCCTGTATTGATAGGAGAACCGGGTGTAGGTAAAACAGCTATTGCTGAAGGTCTGGCTTTGAGAATAGCTGAGAGAT
CCGTTCCTGCAAAAATACAGAATTCTGAGGTTTACCTTCTGGATATGACCAGTGTGGTTGCCGGAACACAATTCAGAGGA
CAGTTTGAAAGCAGGATGAAGGGAATAATCGATGAAGCAAAATCGTTTGGAAATATAATTCTTGTCATTGATGAACTCCA
TAATATAATGGGTGCCGGCGAGGCTGAAGGAGCTATGAATGCTGCTAACATTTTAAAGCCCGCTTTATCCAGAGGTGAAA
TTCAGGTGATTGGTGCGACAACGCTAAACGAATACAGAAAGCATATAGAAAAGGACACCGCTTTAGAGCGCAGATTCCAG
CCTATTATTGTTGACGAACCATCCATTGAGGAAAGTATAGAAATTCTTAGAGGCATCAAGCACTACTATGAACAATACCA
TAGAGTTAAAATAAATGATGAGATAGTAAAGGCCGCAGTAAATTACTCTGAAAGGTATATTACCGACAGACTTTTACCTG
ATAAAGCCATTGATGTAATAGATGAAGCAGGCTCCAGAGCCAACCTGAGAAATACAAAGCTTGCTGAGCTTCAATCATAC
AAGGATGAACTGAAGAAAGTACAAGAGGAGAAGGAATTTGCGGTTTCAGCTGATTCCATAGAAGATTACCAGAAGGCAGC
TGATTTAAAGGTTTATGAATGTAAGCTCCAGGAGCTTATTAAAGATATAGAGGATACAAGTAAAGATGTAGAACTTACTG
TGGAGGACATAGCAGCAGTAATAGAAGCATGGACAAAGATACCTATTCAAAGACTTAGTGAGGGTGAATCCGAAAAGCTT
ATGAGTCTTGAATCACGTATTCATCAGAGGGTAATAGGACAGGAAAAAGCTGTAGAGGGCGTTGCAAAGGCAATAAGACG
AAGTAGGTCAGGTTTCAAAAAGAAGAAGAAGCCATCCTCCTTTATTTTTGTCGGTCCCACTGGTGTAGGTAAGACCGAGC
TGGTAAGAGCTCTTTCAACAGAACTTTTTGGAAGCGAAGAAGCCCTAATAAGGCTTGATATGTCAGAATACATGGAAAAG
CATACAGTATCAAAATTAATAGGTTCACCTCCGGGATATGTGGGTTATGATGATGCAGGTCAATTAACGGAGAAAGTAAG
AAGAAGACCGTATTCAGTAATACTGTTGGATGAAATTGAGAAGGCCCACCCGGACGTTTTTAATATGCTTCTTCAAATTC
TTGAAGACGGAAGGCTTACAGACAGTCACGGAAAGACTGTAAACTTTGAGAATACTATTATTATTATGACATCAAATGCA
GGAACTAATTTTAAATCCGGTGGCATAGGTTTTGCAAATAATACCTATATTGCACTTGAAAGCAGGGTAAGAGATGTAAT
AAAAGAAACTTTCAGGCCGGAGTTCCTGAACAGAATAGATGAGATAATTGTATTCACTGAACTTGGAACTGATGAACTAA
AGAAAATAATCGATCTGATGTTAGAAGAGGTATATCAGGAAGCCAGTGAAAAGGATATCAGAGTGAATGTTTCAGATAAA
GTTAAGGAATTCATACTGGAAAAAGGATATGATCCAAAGTTTGGTGCCAGACCTTTGAGAAGAACAGTACAGAACTACAT
TGAGGACCGCCTGTCAGAAGAGTATTTAAAAGGTACGATGAAGGAAGGTTCACTGGTAGGGATTGATATTGATGAAAATA
ATGAAGTTGTTTTAAAAATTGTTTAA

Protein sequence :
MIKCSICNKNIAVVFVTKIIDGKQIQEGLCVSCAKKQNLQPIDQLLSQTGMTEYELENISKQVGDMLEEMDGSEIMEAMQ
VDPENINQANPFFSILNKAFPKTGDSELNNSNKNIQPVGQDKNGEDKDRNYTKTKAQDKKNVKKKKYLEMYGTNLIDKAK
EGSIDNIIGRTREIERVIQILNRRTKNNPVLIGEPGVGKTAIAEGLALRIAERSVPAKIQNSEVYLLDMTSVVAGTQFRG
QFESRMKGIIDEAKSFGNIILVIDELHNIMGAGEAEGAMNAANILKPALSRGEIQVIGATTLNEYRKHIEKDTALERRFQ
PIIVDEPSIEESIEILRGIKHYYEQYHRVKINDEIVKAAVNYSERYITDRLLPDKAIDVIDEAGSRANLRNTKLAELQSY
KDELKKVQEEKEFAVSADSIEDYQKAADLKVYECKLQELIKDIEDTSKDVELTVEDIAAVIEAWTKIPIQRLSEGESEKL
MSLESRIHQRVIGQEKAVEGVAKAIRRSRSGFKKKKKPSSFIFVGPTGVGKTELVRALSTELFGSEEALIRLDMSEYMEK
HTVSKLIGSPPGYVGYDDAGQLTEKVRRRPYSVILLDEIEKAHPDVFNMLLQILEDGRLTDSHGKTVNFENTIIIMTSNA
GTNFKSGGIGFANNTYIALESRVRDVIKETFRPEFLNRIDEIIVFTELGTDELKKIIDLMLEEVYQEASEKDIRVNVSDK
VKEFILEKGYDPKFGARPLRRTVQNYIEDRLSEEYLKGTMKEGSLVGIDIDENNEVVLKIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-154 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ccel_2116 YP_002506441.1 ATPase AAA VFG0079 Protein 5e-161 54
Ccel_2116 YP_002506441.1 ATPase AAA VFG0080 Protein 2e-151 53