Gene Information

Name : Ccel_1820 (Ccel_1820)
Accession : YP_002506149.1
Strain : Clostridium cellulolyticum H10
Genome accession: NC_011898
Putative virulence/resistance : Unknown
Product : transposase IS200-family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 2176828 - 2177292 bp
Length : 465 bp
Strand : -
Note : PFAM: transposase IS200-family protein; KEGG: dsy:DSY1392 hypothetical protein

DNA sequence :
GTGATTTTAATGGCAAATAAAGAAAATAGTTTAGCACATACCAAATGGATGTGTAAGTATCACATAGTATTCACTCCAAA
GTATAGACGAAAAGTAATATACAATCAATACAAACAAAGCATACGAGAAATATTGATACGATTATGCAAGTATAAGGGAG
TAGAAATACTTGAAGGGCATCTAATGCCAGATCATATACACATGTTAGTAAGTATACCACCAAAGATATCAGTTTCAACA
TTTATGGGTTATCTTAAGGGAAAAAGTGCATTGATGATATTCGATAAGCATGCAAACCTAAAGTATAAGTTCGGAAATAG
ACATTTTTGGGCAGAGGGCTTCTATGTGAGTACTGTAGGGCTTAATGAAGCAACTATTAGAAAGTATATCCAAGAGCAGG
AAAAGCACGATATTATGGTAGATAAACTAAGCGTGAAAGAGTATGAAGACCCCTTCAAGGGGTAG

Protein sequence :
MILMANKENSLAHTKWMCKYHIVFTPKYRRKVIYNQYKQSIREILIRLCKYKGVEILEGHLMPDHIHMLVSIPPKISVST
FMGYLKGKSALMIFDKHANLKYKFGNRHFWAEGFYVSTVGLNEATIRKYIQEQEKHDIMVDKLSVKEYEDPFKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 1e-41 65
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 1e-39 64
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 7e-40 64
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 4e-43 62
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 2e-37 55