Gene Information

Name : Ccel_1751 (Ccel_1751)
Accession : YP_002506082.1
Strain : Clostridium cellulolyticum H10
Genome accession: NC_011898
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2097733 - 2098617 bp
Length : 885 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase; KEGG: cth:Cthe_0676 tyrosine recombinase XerD subunit

DNA sequence :
ATGGAAGCTAATGTTGAAAAGTTTATTAATTTTCTAGAGAGAGATAAGAGATTATCGCTCAATACGCTTCAGTCCTATAA
GCGGGACATAGAACAATACATAACATACTTGAAAGAAATTAATGTAACCAACATCGTAAATACTAATAAGACAACTGTAA
TTGCCTACTTGTTACATTTACAGAAAAAGGGTAGAGCTACATCTACCATATCTAGGAACCTTGCATCCATAAGGTCCTTT
TATCAATTCCTCTATAAGGATAAAGTTATTGACAATGACCCTACCTCAGAGTTGGAATCACCTAAAGTAGAAAAAAAGCT
TCCTCAGATATTGTCAACCCAAGAGGTCGAGTTGCTTCTCGATCAGCCTAAGTGTCTTGATCTTAAAGGAATTCGTGACA
AGGCTATGCTTGAATTGTTGTACGCAACAGGAATTCGTGTTTCAGAACTTATATCACTAAATTTAGATGATATAAATTTT
GACCTCGGGTTGATTAAATGCAACAAAGGAACACGTGAAAGAACAATTCCCATCGGATCCATATCAACAGCCGCGGTACA
CGAATATCTAGAGAAATCCCGTAATTTTTTGATACAGGACAGTCAGGAAATAGCACTTTTTGTAAATGTAAACGGTAAGA
GACTGACAAGACAAGGCTTCTGGAAAATCATAAAGCATTACAAAAATCAAGCCAAAATAAATAAGGACATTACACCACAT
ACATTAAGACATTCCTTTGCGGCACATTTGCTTGAAAATGGTGCGGATCTAAGGTCAATACAGGAAATGCTGGGTCATTC
AGATATTTCTTCAACTCAGATATATGCACAGATAGCTAAAAACAAAATTAAAGATGTTTACAAAAAAACTCATCCCAGAG
CATAA

Protein sequence :
MEANVEKFINFLERDKRLSLNTLQSYKRDIEQYITYLKEINVTNIVNTNKTTVIAYLLHLQKKGRATSTISRNLASIRSF
YQFLYKDKVIDNDPTSELESPKVEKKLPQILSTQEVELLLDQPKCLDLKGIRDKAMLELLYATGIRVSELISLNLDDINF
DLGLIKCNKGTRERTIPIGSISTAAVHEYLEKSRNFLIQDSQEIALFVNVNGKRLTRQGFWKIIKHYKNQAKINKDITPH
TLRHSFAAHLLENGADLRSIQEMLGHSDISSTQIYAQIAKNKIKDVYKKTHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-47 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-47 42