|
Name : Ccel_1559 (Ccel_1559) Accession : YP_002505891.1 Strain : Clostridium cellulolyticum H10 Genome accession: NC_011898 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1908983 - 1909795 bp Length : 813 bp Strand : - Note : PFAM: integrase; KEGG: afl:Aflv_2378 transposase DNA sequence : ATGTGCCAAATACTAAAAATATCAAGAAGCGGTTATTATGCTTGGATTAAAAGGCCTGAAAGCTTGCGCAAGAAAAGGAA TGTGGAACTTCTTGAAAAAATCAGAAACATTCACAAAGTATCCCGTGAAACCTATGGAAGCCCCCGGATAACCAAGGCTT TAAAGAATGAAGGCATAAACTGTGGTAAAAATCGTATAGCTAAACTGATGAAGGAAAATAATATTACTGCTAAAACTAGG AAGAAGTTTAAGGCTACAACTAATTCAAAGCACAATTACCCGGTTGCAGATAATATCCTAAATCAGGACTTTACAGCTTC TAGGCCTAATCAAATCTGGGTTGCAGATATTACTTATATTCCTACAGACGAGGGTTGGCTCTATTTGGCTGCCATTGTTG ATCTCTACAACAGAAAAGTTGTTGGATGGGCAATGGATATCACTATGACAAAACAGCTTTGTATAGATGCTTTAAAGCAA GCCATCGGCAGGCAGAGACCATCAAATGGAGTGATTCATCATTCCGACCGAGGGGTCCAATATGCCAGCAAGGAATATCA GAAAGTACTGAAAAGCAATGGTTTTACAGCAAGTATGAGTCGCAAGGGTAACTGTTACGATAATGCCTGTATGGAATCAT TCTTTGGAACTCTCAAAACGGAGCTTATTTACTTAACAAGGTTCAAAACAAGGACTGAGGCCCGTCTGGCTATCTTTGAG TATATTGAAGTCTTTTATAATCGGATACGATTACATTCAAAGCTTGGCTATAAGTCGCCTGTGGAATTTGAAAAGCAAAA CAAAGCTGCTTAA Protein sequence : MCQILKISRSGYYAWIKRPESLRKKRNVELLEKIRNIHKVSRETYGSPRITKALKNEGINCGKNRIAKLMKENNITAKTR KKFKATTNSKHNYPVADNILNQDFTASRPNQIWVADITYIPTDEGWLYLAAIVDLYNRKVVGWAMDITMTKQLCIDALKQ AIGRQRPSNGVIHHSDRGVQYASKEYQKVLKSNGFTASMSRKGNCYDNACMESFFGTLKTELIYLTRFKTRTEARLAIFE YIEVFYNRIRLHSKLGYKSPVEFEKQNKAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 4e-56 | 53 |
| unnamed | AAF09030.1 | unknown | Not tested | SHI-O | Protein | 3e-56 | 53 |
| c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 5e-56 | 53 |
| tnpI | AAD44751.1 | TnpI | Not tested | SHI-2 | Protein | 3e-56 | 53 |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 1e-56 | 53 |
| unnamed | AAB86997.1 | hypothetical 31 KD protein | Not tested | SHI-1 | Protein | 3e-56 | 53 |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 1e-56 | 53 |
| unnamed | AAF09022.1 | unknown | Not tested | SHI-O | Protein | 2e-56 | 53 |
| unnamed | AAQ07468.1 | TnpI-like protein | Not tested | Not named | Protein | 1e-55 | 52 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 9e-59 | 49 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 9e-59 | 49 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 9e-59 | 49 |
| insF | CAC43414.1 | transposase of insertion element IS3 | Not tested | PAI III 536 | Protein | 1e-48 | 45 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 6e-47 | 44 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 2e-47 | 44 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 1e-46 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ccel_1559 | YP_002505891.1 | integrase | VFG1706 | Protein | 2e-56 | 53 |
| Ccel_1559 | YP_002505891.1 | integrase | VFG1631 | Protein | 6e-49 | 45 |
