Gene Information

Name : hemC (Ccel_1277)
Accession : YP_002505613.1
Strain : Clostridium cellulolyticum H10
Genome accession: NC_011898
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 1580898 - 1581779 bp
Length : 882 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGAAAAAAATCAGAATAGGCAGCAGGGACAGCAAGCTTGCAATTATACAATCCGAGATGGTAATGGCTGCAATCAGAGA
ATTTGACCCTGATATAGAGCTGGAATTGATTACAATGAAAACTACGGGAGATAAGATTCTGGACAAAACCCTTGATAAAA
TAGGAGGAAAGGGCCTTTTCGTCAAGGAGCTTGATTATGCACTATACAATAATGAGGTGGATATAACCGTACACAGTTAC
AAGGATATGCCTCTGGAGGATAATCCGAAGTTGCCTGTTGTAGCTTTGTCAAAGCGTGAAGACCCCAGAGATGCCTTTGT
TTTGCCTCAAGGTGAAATTGCAGAAAACAATGAACCTATAGGAAGTTCAAGTCAGAGGAGACAGCTGCAGTTAAAAGCTT
TATTTCCTAATCGTAAAACAGCCCCAATTCGTGGAAATGTACAAACCCGCCTTAAAAAACTTGACAGCGGTGAGTTTTCA
GCTATAGTACTTGCTGCTGCGGGAATTAAGAGACTTGGCCTTGAAAGTCGTATCAGCAGATACTTTTCAGTTGATGAAAT
TCTTCCAGCGGCAAGTCAGGGTATTATAGCAGTACAGGGCAGAGCCGGAGAGAACTTTGATTTTCTGAAGCTTTTCCATA
GTGAGGAATCCCTATGTATTTCACAGGCAGAAAGAACCTTCGTACGAGAAATGAATGGCGGTTGCAGTACACCAATCGCG
GCTTATGCAACCATTGTAGAAAGTGAAATTATTCTCAAGGGCTTGTACCATAATGAAGCTACGGGGGAATCAAAGAAGGA
ATGTGTTTCAGGAAGCAGGCAAAATCCTGTGGAATTAGGCTATGAACTGGTAAAAAAGATGGAAAGCTGCAGAAGGATTT
AA

Protein sequence :
MKKIRIGSRDSKLAIIQSEMVMAAIREFDPDIELELITMKTTGDKILDKTLDKIGGKGLFVKELDYALYNNEVDITVHSY
KDMPLEDNPKLPVVALSKREDPRDAFVLPQGEIAENNEPIGSSSQRRQLQLKALFPNRKTAPIRGNVQTRLKKLDSGEFS
AIVLAAAGIKRLGLESRISRYFSVDEILPAASQGIIAVQGRAGENFDFLKLFHSEESLCISQAERTFVREMNGGCSTPIA
AYATIVESEIILKGLYHNEATGESKKECVSGSRQNPVELGYELVKKMESCRRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-43 43
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-43 43