Gene Information

Name : Mnod_6201 (Mnod_6201)
Accession : YP_002501312.1
Strain : Methylobacterium nodulans ORS 2060
Genome accession: NC_011894
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6317832 - 6318719 bp
Length : 888 bp
Strand : -
Note : PFAM: protein of unknown function DUF932; KEGG: mpt:Mpe_A1665 putative F plasmid protein

DNA sequence :
ATGTTTCACGACATCCGCACGGTTCAGACCGCCCGCATCACCCGCTTCGGCTCGGGCGCGGTCGTCGTCCGCAACAACGG
CGGCCTCGATGAGGCCGCCCTGCGCAGCGCGGCGCCGACCGTCTTCGCGGAAGACAAGCACAGCTCGCGCTCGGACAAGT
ACACCTACATCCCGACCGTCGAGGTGCTGCGCGGCCTCGGCCGCGAGGGCTTCCTGCCGGTCGAGGTCCGGGTCGGCGGG
ACCCGAGACGAGGAGAAGCGGGGGTACACGAAGCACCTCCTGCGCCTGCGCCGGATGGGCGATGCGCCGACCCGGGTCGG
CGACTCCTCCCGCGAGCTGGTGCTGCTCAACAGCCACGACGGCACCTCGTCGTACCAGCTGATGAGCGGGCTGTTCCGGC
TGATCTGCTCGAACGGCCTCGTGTGCGCCGACGGCGACGCCCAGATCCTCAAGATCCCGCACAAGGGCGACATCGTTCAG
CAGGTGATCGATGGGGCCTACCGGATCGTGGACGCCTCCGAGGAGGTCGATCGGATCGCCGCGGAGATGAAGCAGATCGA
GCTTCGCCCGGCCGAGCAAGACGCTTTTGCCGAGGCGGCCGCGGAGCTGCGGTGGAACGGGGAGGGCCAAAGGGTCCCGG
TCGAGCCCCGCCAGATCCACGCGCCGCGCCGCCGGGAGGACGTCGGCAACTCGCTTTGGTTGGCGTTCAATCGGACCCAG
GAGGGCCTGATCCGCGGCGGGATCGACTACCAGCAGCGCAACCCGGAGACGGGCCGGCTGATCGCCCGCCGGCAGACCCG
GCCGGTCCAGGGCGTGGACGGCAATACGGCGCTTAACAGAGCCCTGTGGGTCCTGGCGAACAGGATGGCCGAGTTGAAGG
CGGCCTGA

Protein sequence :
MFHDIRTVQTARITRFGSGAVVVRNNGGLDEAALRSAAPTVFAEDKHSSRSDKYTYIPTVEVLRGLGREGFLPVEVRVGG
TRDEEKRGYTKHLLRLRRMGDAPTRVGDSSRELVLLNSHDGTSSYQLMSGLFRLICSNGLVCADGDAQILKIPHKGDIVQ
QVIDGAYRIVDASEEVDRIAAEMKQIELRPAEQDAFAEAAAELRWNGEGQRVPVEPRQIHAPRRREDVGNSLWLAFNRTQ
EGLIRGGIDYQQRNPETGRLIARRQTRPVQGVDGNTALNRALWVLANRMAELKAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 7e-57 45
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 4e-51 43
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 4e-51 43
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 4e-51 43
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 7e-56 43
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 2e-51 42
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 2e-51 42
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 6e-51 42
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 5e-51 42
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 6e-51 42
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 9e-49 42
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-49 42
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-49 42
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-49 42
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 7e-51 42
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 2e-50 42
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 6e-51 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mnod_6201 YP_002501312.1 hypothetical protein VFG0658 Protein 9e-52 42
Mnod_6201 YP_002501312.1 hypothetical protein VFG1526 Protein 3e-51 42
Mnod_6201 YP_002501312.1 hypothetical protein VFG1615 Protein 3e-51 42
Mnod_6201 YP_002501312.1 hypothetical protein VFG1676 Protein 5e-49 42