Gene Information

Name : Mnod_6194 (Mnod_6194)
Accession : YP_002501306.1
Strain : Methylobacterium nodulans ORS 2060
Genome accession: NC_011894
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 6313662 - 6314330 bp
Length : 669 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mlo:mlr6617 two-component system, regulatory protein

DNA sequence : 
ATGCGCATTCTTCTTGTCGAGGACGATCCCCGCGTTGCCCGCAAGGTCGCAGCCGTCCTGACGGAGGCGGGCTACGCCGT
TGATCATGTTGAGGACGGCGAAGAGGCCTGGTTCCGGGGGGACACGGAGGACTACGATCTCGCCGTCCTCGACCTCGGAC
TGCCGAAGATGGATGGCCTTGCCGTGCTGAAGCGGTGGCGCGCGGCCGGACGTGACCTGCCGGTTCTGATCCTCACCGCG
CGCGGCGCCTGGGCGGAGCGGGTCGAGGGCATCGATGCCGGTGCCGACGACTATCTCACCAAGCCCTTCGCCATGGAGGA
GTTGTTGGCCCGCGTGCGGGCGCTCCTGCGCCGGGCCGCCGGCCGGGCCGTGCCGGTCTTCATCTCGGGACCGGTCGTGC
TCGACACCCGCAAGATGCGGGTCACGGCCGATGACGTTCCCCTCAACCTCTCGCCGCTCGAATACCGCTGCCTGAGCTAC
CTCATGCACCATGCCGGGCGGGTGATCCCTCCGACGGAATTGATGGAGCATCTCTACGCGCATGACCACGATCGCGACCC
GAATGCGCTGGAGGTGCTTGTCGGACGCCTGCGCCGGAAGCTCGGCGTCGATCTGATCGAGACCCGGCGCGGCTTCGGCT
ACCTCGTGCCGGAGCCTGCGCCGACATGA

Protein sequence : 
MRILLVEDDPRVARKVAAVLTEAGYAVDHVEDGEEAWFRGDTEDYDLAVLDLGLPKMDGLAVLKRWRAAGRDLPVLILTA
RGAWAERVEGIDAGADDYLTKPFAMEELLARVRALLRRAAGRAVPVFISGPVVLDTRKMRVTADDVPLNLSPLEYRCLSY
LMHHAGRVIPPTELMEHLYAHDHDRDPNALEVLVGRLRRKLGVDLIETRRGFGYLVPEPAPT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-26 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mnod_6194 YP_002501306.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 1e-41 49
Mnod_6194 YP_002501306.1 winged helix family two component transcriptional regulator BAC0487 Protein 4e-28 44
Mnod_6194 YP_002501306.1 winged helix family two component transcriptional regulator CP000647.1.gene1136. Protein 1e-32 42
Mnod_6194 YP_002501306.1 winged helix family two component transcriptional regulator BAC0530 Protein 1e-32 42
Mnod_6194 YP_002501306.1 winged helix family two component transcriptional regulator CP001918.1.gene2526. Protein 3e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mnod_6194 YP_002501306.1 winged helix family two component transcriptional regulator VFG0473 Protein 1e-25 42
Mnod_6194 YP_002501306.1 winged helix family two component transcriptional regulator VFG1390 Protein 8e-23 42