Gene Information

Name : Mnod_6090 (Mnod_6090)
Accession : YP_002501218.1
Strain : Methylobacterium nodulans ORS 2060
Genome accession: NC_011894
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 6203488 - 6205086 bp
Length : 1599 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_5346 ABC transporter related

DNA sequence :
ATGGACCCGCTCCTCACTTTAAGCGGGCTCTCGGTCTCCTATGGCGGGGTCGCGGCCCTGTCGGGGCTCGACCTCGCGGT
CGGCCGGGGCGAGACGCTCGCCCTCGTCGGCGAATCGGGCTCCGGCAAGAGCCAGGCGGCCCTGGCGGTCATGGGCCTGC
TGCCGGAGACCGCCCGTGCCTCCGGCTCGGTTCGGTTCGATGGGACCGAACTCGTCGGCCTGCCCCGTCCGGCCCTCGAC
CGCATCCGGGGGGCGCGCATCGGCATGGTGTTCCAGGAGCCGATGAGCGCGCTGCATCCGCTCTTCACCATCGGCCACCA
GATCGCCCTGCCGTTGCGGGCCCATCGCGGCCTGTCGCGACGGCAGGCCCGCGCCCGGGCCCTCGACCTCCTGAGCCTCG
TCGGCCTGCGCGATGCGGGGGCGCGGCTCACGGCCTATCCGCACGAGCTCTCGGGGGGCGAGCGCCAGCGGGTGATGATC
GCGATGGCGCTCGCCTGCGAGCCCGACCTCCTCATCGCGGACGAGCCGACCACGGCCCTCGACGTCACGGTGCAGGCGCA
GGTGCTGGCGCTGCTTGCCGACCTCAAGACCCGGCTCGGGCTGGCGCTCCTGTTCATCACCCACGACCTGCGCCTGGTGC
GGCGGATGGCCGAGCGCACCGCCGTACTGCGGGCCGGGCGCCTCGTGGAAGTCGGGCCCACCGAGCGACTGTTCCTGCAG
CCCGCGGCGCCCGAGACGCGCGACCTCCTCGCCGCCGAGCCTGCGGGGCGCAAGGCGCCGGTCCCGGCCGGGGCGCCCGT
GGTGCTGGAGGGAAGCGGGATCACGGTGTCGTATCCGGGCCGCGGCGGGCTGTTGCGCCGGGCGGCCCCGCGGGTTGCCG
TGCGGGGCATCGACCTGTCCCTGCGGGCCGGGCAGACGCTCGGGGTCGTGGGCGAATCGGGCTCGGGCAAGTCGAGCCTC
GGGCGGGCGCTGCTGCGCCTCGAGCCGGCGGCGACCGGGATCGTGCGCTTCGAGGACCGCGACCTGACGCGGCTCGACCG
GGCGGCTTTGCGCCCCCTGCGCCGAGGCTTCCAGCCGGTGTTCCAGGATCCGAACGGTTCGCTCTCGCCGCGGCTGAATG
CGGGCGAGATCGTCGCGGAGGGCCTGCGGGTCCATGCGCCGGCCTTGAGCGCCCGCGAGCGCGACGCGCGGGTGGCCGAG
GCCTTCGCGGAGGTGCGCCTCGATCCGGACTGGCGCCACCGTTTCCCGCATGCCTTCTCCGGCGGCCAGCGCCAGCGCAT
CGCCATCGCCCGGGCGATGATCCTGCGCCCGAAGGTCGTGGTGCTCGACGAGCCGACCTCCGCCCTCGACCGCACGGTGC
AGCGGGACATCGTCGCGCTCCTGCGCGACCTCCAGGCGGCGCACGGCCTCGCCTACCTGTTCATCAGCCACGACCTCGCC
GTGGTGCGCGCGCTCGCCGACACGGTGCTGGTGCTGCGCGACGGGTGCGAGGTGGAGCGGGGCGAGACGCAGGCCGTGCT
GGAGCGCCCGCGCGCGGCCTATACGCGGGCGCTCGTCGCGGCGGCGGGGCTCGACACCGGACCGGTCGAGACACCGTGA

Protein sequence :
MDPLLTLSGLSVSYGGVAALSGLDLAVGRGETLALVGESGSGKSQAALAVMGLLPETARASGSVRFDGTELVGLPRPALD
RIRGARIGMVFQEPMSALHPLFTIGHQIALPLRAHRGLSRRQARARALDLLSLVGLRDAGARLTAYPHELSGGERQRVMI
AMALACEPDLLIADEPTTALDVTVQAQVLALLADLKTRLGLALLFITHDLRLVRRMAERTAVLRAGRLVEVGPTERLFLQ
PAAPETRDLLAAEPAGRKAPVPAGAPVVLEGSGITVSYPGRGGLLRRAAPRVAVRGIDLSLRAGQTLGVVGESGSGKSSL
GRALLRLEPAATGIVRFEDRDLTRLDRAALRPLRRGFQPVFQDPNGSLSPRLNAGEIVAEGLRVHAPALSARERDARVAE
AFAEVRLDPDWRHRFPHAFSGGQRQRIAIARAMILRPKVVVLDEPTSALDRTVQRDIVALLRDLQAAHGLAYLFISHDLA
VVRALADTVLVLRDGCEVERGETQAVLERPRAAYTRALVAAAGLDTGPVETP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-61 42
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-57 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-57 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-57 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-57 41