Gene Information

Name : rph (Mnod_4763)
Accession : YP_002499930.1
Strain : Methylobacterium nodulans ORS 2060
Genome accession: NC_011894
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 4844356 - 4845069 bp
Length : 714 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGTCCGTCCAAGCGTGCGCCGGAGGAATTGCGCAAGGTCACGCTGGAGCGGGGCGTCGCGCGCTACGCCGAGGGCTC
CTGCCTCGTCACCTTCGGCGAGACCCGGGTGCTGTGCACCGCCTCGCTGGAGGAACGCGGCCCGTCCTGGCTGCGCGGCT
CCGGCAAGGGCTGGATCACCGCCGAATACGCCATGCTCCCGCGCGCGACCCATGAGCGCAACCGGCGCGAGGTCAATGCG
GGCAAGCCCTCGGGCCGCACGCAGGAGATCCAGCGGCTGATCGGCCGCTCGCTGCGCGCGGTGGTGAACCTGCCCGCCAT
CGGCGAGCGCCAGATCGTGATCGACTGCGACGTGCTGCAGGCCGATGGCGGCACCCGCACCGCCTCGATCACGGGCGCCT
GGGTGGCCCTGCACGAGTGCTTCACCTGGATGCGCAGCCGCTCGATCATCTCGGTCGATCCGATGCGCGACCACGTGGCC
GCCGTGTCCTGCGGCATCCACAAGGGCACGCCGATCCTCGACCTCGACTATGCGGAGGATTCCGCCGCCGAGACCGATGC
GAACTTCGTCATCACGGGCTCGGGCGGCATCGTGGAGGTGCAGGGAACCGCCGAGGTCACGCCCTTCTCGGAGGAGGAGT
TCCTGGGCCTGCTGCGGCTCGCCAAGAGCGGCGTCGCCCAGCTCGTCGCCCTGCAGAAGCAGGCCGTGGGCTAG

Protein sequence :
MRPSKRAPEELRKVTLERGVARYAEGSCLVTFGETRVLCTASLEERGPSWLRGSGKGWITAEYAMLPRATHERNRREVNA
GKPSGRTQEIQRLIGRSLRAVVNLPAIGERQIVIDCDVLQADGGTRTASITGAWVALHECFTWMRSRSIISVDPMRDHVA
AVSCGIHKGTPILDLDYAEDSAAETDANFVITGSGGIVEVQGTAEVTPFSEEEFLGLLRLAKSGVAQLVALQKQAVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 5e-53 52