Gene Information

Name : Mnod_4171 (Mnod_4171)
Accession : YP_002499352.1
Strain : Methylobacterium nodulans ORS 2060
Genome accession: NC_011894
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4230178 - 4230855 bp
Length : 678 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: met:M446_4436 two component transcriptional regulator

DNA sequence : 
GTGCGTCTGCTCGTCGTCGAGGATGACCGGGATCTCAACCGGCAGGTCGTCACCGCCCTGGAACAGGCGGGCTACGCCGT
CGACAAGGCGTTCGACGGCGAGGAGGGCGCCTTCCTCGGCGAGACCGAACCCTATGACTGCATCATCCTCGACATGGGCC
TGCCGAAGCAGGACGGGGTGACGGTGCTGTCCGGCTGGCGCCGGGCGCAGGTGAAGACGCCGGTCATCATCCTGACCGCC
CGCGACCGCTGGAGCGACAAGGTCAACGGCTTCGATGCGGGCGCCGACGATTACGTCACCAAGCCCTTCCACATGGAGGA
GCTGCTCGCCCGGGTGCGCGCCATCCTGCGGCGGGCTGCGGGCCATGCGTCGAGCCAGATCAGCGCCGGTCCGGTGACCC
TCGATACCCGCTCGGGCCGCGTCTTCGTGGACGGCAGCCCGGTCAAGCTCACCTCGCACGAGTACCGCCTGCTCTCCTAC
CTGATGCATCATACCGGCCGCGTGGTCTCCCGGGCGGAACTCACCGAGCATCTCTACGACCAGGATTTCGACCGTGATTC
GAACACCATCGAGGTCTTCGTCGGGCGCCTGCGCAAGAAGCTCGCGGTCGATCTGATCCAGACCGTGCGCGGCCTCGGCT
ACCTGATCGATCCCGGCGCCGGCTCCGCCCCGTCATGA

Protein sequence : 
MRLLVVEDDRDLNRQVVTALEQAGYAVDKAFDGEEGAFLGETEPYDCIILDMGLPKQDGVTVLSGWRRAQVKTPVIILTA
RDRWSDKVNGFDAGADDYVTKPFHMEELLARVRAILRRAAGHASSQISAGPVTLDTRSGRVFVDGSPVKLTSHEYRLLSY
LMHHTGRVVSRAELTEHLYDQDFDRDSNTIEVFVGRLRKKLAVDLIQTVRGLGYLIDPGAGSAPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mnod_4171 YP_002499352.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 7e-37 47
Mnod_4171 YP_002499352.1 winged helix family two component transcriptional regulator CP000647.1.gene1136. Protein 2e-36 46
Mnod_4171 YP_002499352.1 winged helix family two component transcriptional regulator BAC0530 Protein 2e-36 46
Mnod_4171 YP_002499352.1 winged helix family two component transcriptional regulator CP001918.1.gene2526. Protein 4e-35 45
Mnod_4171 YP_002499352.1 winged helix family two component transcriptional regulator BAC0487 Protein 2e-32 44
Mnod_4171 YP_002499352.1 winged helix family two component transcriptional regulator CP000034.1.gene2022. Protein 6e-36 44
Mnod_4171 YP_002499352.1 winged helix family two component transcriptional regulator NC_002695.1.913289.p Protein 6e-36 44
Mnod_4171 YP_002499352.1 winged helix family two component transcriptional regulator CP001138.1.gene1939. Protein 7e-36 44
Mnod_4171 YP_002499352.1 winged helix family two component transcriptional regulator BAC0197 Protein 1e-28 43
Mnod_4171 YP_002499352.1 winged helix family two component transcriptional regulator CP004022.1.gene1005. Protein 9e-37 43
Mnod_4171 YP_002499352.1 winged helix family two component transcriptional regulator BAC0125 Protein 6e-30 41
Mnod_4171 YP_002499352.1 winged helix family two component transcriptional regulator BAC0111 Protein 7e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mnod_4171 YP_002499352.1 winged helix family two component transcriptional regulator VFG0475 Protein 7e-36 44