Gene Information

Name : Mnod_0403 (Mnod_0403)
Accession : YP_002495748.1
Strain : Methylobacterium nodulans ORS 2060
Genome accession: NC_011894
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 449484 - 451136 bp
Length : 1653 bp
Strand : +
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: met:M446_2207 ABC transporter related

DNA sequence :
ATGACCGCGCCCGTGCTGGAGATCCGGGATCTGGCCATCCCGCTGCCGCTGCGCGCCGACCGGGCCTACGCGGTCGAGGG
CGTCTCGCTCGCGGTCGCCCCGGGCGAGATCCTCTGCGTCGTCGGCGAGTCGGGCTCAGGCAAGTCGGTCACGGCCCATG
CGGTGATGGGCCTGCTGCCGCCCGTCCTGAAACCATCGCGGGGGGAGATCCTGCTGCAGGGCGAGGACGTGCTGAAGGCC
ACGCCCGCCCGCCTGCGGGGCCTGCGCGGCGGCCGGATGGCGATGGTGTTCCAGGAGCCGATGACGGCGCTGAACCCGGT
GCTGACCGTGGGGGCGCAGATCGACGAGATCCTGGAGGCCCATGCCGACCGGCTCGGGGCGGCCGAGCGCCGGGCGCGGG
TGATCGCGCTCATGCGCGACGTGCACCTGCCCGATCCCGAGCGGATGGCCGGCGCCTATCCGCACCAGCTCTCGGGCGGG
CAGCGCCAGCGGGTGATGATCGCCATGGCGCTCGCCAACGATCCGGCGCTGATCATCGCGGACGAGCCGACGACCGCCCT
CGACGTGACGACCCAGGCCCAGATCCTGCGCCTCCTGCGCGAGCTGCAGGCGCGGCGCGAGGCCGGGATCCTGTTCATCA
CCCACGATTTCGGGGTGGTGGCGGAGATCGCCGACCGGGTCGCCGTGATGCAGGGCGGGCGCCTCGTCGAGGCGGGGCCG
GCCCGCGAGGTGCTGCATCACCCGCAGGATCCCTATACCCGCATGCTGATCGCCGCGGTGCCCTCCGCGACGCCGCCCCC
GCCGCGCCAGCGCCCCGCCGCCCAGGCGCCCGTTCTCACCGTCCGCGACCTGGAGAAGACCTATGGCGGCAGCCTGTTCT
CGCGGGCGGGGCGCCATGTGCGCGCCCTCGACGGGGTCAGCCTCGCGCTGAAGCCCGGGGAGACGCTCGGGATCGTGGGC
GAATCCGGCTCCGGCAAGTCGACGCTCGCCCGCTGCATCGCCCGCTTCGTCGATCCCAGCTCCGGGGAGATCCGCCTCGA
CGGCACCGATATCGCCCGGCTGTCGGACCGGGCCCTGCATCCCTACCGGCGGCGCGTGCAGGTGATCTTCCAGGATCCCT
ACCGCTCGCTGAACCCGCGGCGCACGGTCGGCCAATCGATCACCGAGGGGCCGCGCAACTACGGCATGGCGCGCGACGAG
GCCCTGGCCCGCGCCCGCCGGCTGATCGGCCTCGTCGGGCTCGATGCCGACGCACTCGACCGCTTCCCGCACGAATTCTC
GGGCGGACAGCGCCAGCGCATCGCCATCGCGCGGGCGCTCGCCATGGAGCCGGACCTGCTCATTGCCGACGAGGCGGTCT
CGGCACTGGACGTCTCGGTGCAGGCCCAGGTGCTCGACCTCTTGGAGGAGGTGCGCGAGCGGCTGAACCTCGCGATCCTG
TTCATCACCCACGACCTGCGCGTGGCTGCGCGCCTCTGCGACCACCTGATCGTCATGCTGAACGGCCGCGTGGTCGAGGA
GGGCGAGACCGCCGCGCTCTTTTCCGATCCGCGCCACGACTACACGAAGGCGCTCTTCGCCGCCGCGCCGGGCGCGAGCG
CCCTTCGGCCAGAGGCGGGCCCGCGCGCCGCGAACGCGGCGCCGCCGCAATAG

Protein sequence :
MTAPVLEIRDLAIPLPLRADRAYAVEGVSLAVAPGEILCVVGESGSGKSVTAHAVMGLLPPVLKPSRGEILLQGEDVLKA
TPARLRGLRGGRMAMVFQEPMTALNPVLTVGAQIDEILEAHADRLGAAERRARVIALMRDVHLPDPERMAGAYPHQLSGG
QRQRVMIAMALANDPALIIADEPTTALDVTTQAQILRLLRELQARREAGILFITHDFGVVAEIADRVAVMQGGRLVEAGP
AREVLHHPQDPYTRMLIAAVPSATPPPPRQRPAAQAPVLTVRDLEKTYGGSLFSRAGRHVRALDGVSLALKPGETLGIVG
ESGSGKSTLARCIARFVDPSSGEIRLDGTDIARLSDRALHPYRRRVQVIFQDPYRSLNPRRTVGQSITEGPRNYGMARDE
ALARARRLIGLVGLDADALDRFPHEFSGGQRQRIAIARALAMEPDLLIADEAVSALDVSVQAQVLDLLEEVRERLNLAIL
FITHDLRVAARLCDHLIVMLNGRVVEEGETAALFSDPRHDYTKALFAAAPGASALRPEAGPRAANAAPPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-64 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-64 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-64 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 4e-64 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-75 43