Gene Information

Name : Mnod_3031 (Mnod_3031)
Accession : YP_002498276.1
Strain : Methylobacterium nodulans ORS 2060
Genome accession: NC_011894
Putative virulence/resistance : Virulence
Product : type VI secretion system effector
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 3122524 - 3123006 bp
Length : 483 bp
Strand : -
Note : TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: azo:azo3897 putative cytoplasmic protein,SciM

DNA sequence :
ATGGCTGTCGATATCTTTCTGAAGCTCGAAGGGATCAAGGGCGAAGCGCAGGACGCCAAGCACAAGGACGAGATCGACAT
TCTGTCGTGGTCCTGGGGCATGTCCCAGTCGGGGACAACGCATATGGGTTCGGGGTCCGGCTCCGGTAAAGTGTCGGTGC
AGGACATCAGCCTGACCAAGTACATCGACAAGGCCTCGCCAACGCTCGCCCAGCACTGCGCCAACGGCAAGCACATCACC
AAGGGCACGCTCATCGTACGCAAGGCGGGCGACAAGCCGCTCGAATACATCGTCATTGAACTCAAGGACATTATCGTCTC
GCATGTCTCTTTGGGCGGCACCTCGCACGACGATCGCCTGCACGAGAGCATCACGCTCAACTTCCGTGAATTCGACTACA
AGTACACGACCCAGGCAGCGAACGGCTCCGCCGGTCCTCAGACCGAGGTCAAATGGGACATCGCGAAGAACGTCGCGGCG
TGA

Protein sequence :
MAVDIFLKLEGIKGEAQDAKHKDEIDILSWSWGMSQSGTTHMGSGSGSGKVSVQDISLTKYIDKASPTLAQHCANGKHIT
KGTLIVRKAGDKPLEYIVIELKDIIVSHVSLGGTSHDDRLHESITLNFREFDYKYTTQAANGSAGPQTEVKWDIAKNVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0302 NP_454882.1 conserved hypothetical protein Not tested SPI-6 Protein 1e-23 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mnod_3031 YP_002498276.1 type VI secretion system effector VFG2071 Protein 8e-26 51