Gene Information

Name : Mnod_1134 (Mnod_1134)
Accession : YP_002496443.1
Strain : Methylobacterium nodulans ORS 2060
Genome accession: NC_011894
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1201143 - 1202069 bp
Length : 927 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: met:M446_2172 tyrosine recombinase XerD

DNA sequence :
ATGAGCCGGGGCGCGCAAGCCCGCGCGGGGCTGATGCAGCCCTATCTGGACATGCTGGCGGCCGAGCGGGGCGCCTCGGC
CAATACCCTGGCGGCCTACCGGCGCGATCTCGACGACTACCTCGCCCACCTTGCGGCGGAGGGGCTCGATCCGGCCGCGG
TGGAGGCCCCGATGATCCGGGCCTACATGGCGGATCTCGATGCGCGGGGCCTCAAGGCCTCCTCGGCGGCGCGCCGCCTG
TCCTGCATCCGCGGCTTCCACCGCTTCCTCTACGCCGAGGGCTACGCCCCCACCGACCCGACCGCGCCCGTCTCGGGGCC
CAAGCGCGGGCGGGCGCTGCCGAAGGTGCTCTCCGTGGCGGAGGTCGACCGGCTGCTCTCCGTCGCCAAGGAGGCCGTCG
CGCAGGCGCCGAACCTAAGCGAGGCGGCCCGCGCCCAGCGCCTGCTCTGCCTGCTCGAACTGCTCTACGCCACGGGCCTG
CGCGTCTCGGAACTCGTGGCCCTGCCGCGGGCGGCGGCCCTCACCAGGGAGCGCTACCTGGTGGTGCGCGGCAAGGGCGG
CCGCGAGCGGCTGGTGCCGCTCACCGAGGCCGCCCGGGCCGCCATGGCGGCGCACCTGACGATGCTGGCGGCGCCCGGCC
CCTGGCTGTTTCCGGCCGACAGCGAGAGCGGGCACCTCACCCGCCAAGCCTTCGCGCGCGACCTCAAGCTCGCGGCGGCA
GCAGCCGGGATCCGCGCCGACCGGGTGAGCCCGCACGTGCTGCGGCACGCCTTCGCGAGCCACCTCCTGCAGAACGGCGC
GGATCTGCGCGTCGTGCAGGAGCTGCTCGGCCACGCCGACATCTCGACGACGCAGATCTACACCCACGTGCTCGACGAGC
GCCTGAAGAGCATGGTGCGCGACCTCCATCCCCTGGCGGATGGCTGA

Protein sequence :
MSRGAQARAGLMQPYLDMLAAERGASANTLAAYRRDLDDYLAHLAAEGLDPAAVEAPMIRAYMADLDARGLKASSAARRL
SCIRGFHRFLYAEGYAPTDPTAPVSGPKRGRALPKVLSVAEVDRLLSVAKEAVAQAPNLSEAARAQRLLCLLELLYATGL
RVSELVALPRAAALTRERYLVVRGKGGRERLVPLTEAARAAMAAHLTMLAAPGPWLFPADSESGHLTRQAFARDLKLAAA
AAGIRADRVSPHVLRHAFASHLLQNGADLRVVQELLGHADISTTQIYTHVLDERLKSMVRDLHPLADG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 6e-24 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 6e-24 42