Gene Information

Name : Mnod_8578 (Mnod_8578)
Accession : YP_002495156.1
Strain :
Genome accession: NC_011892
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 320572 - 321267 bp
Length : 696 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: met:M446_3564 two component transcriptional regulator

DNA sequence : 
ATGGCCGAACGACTCCTCATCATCGACGACGATCGGCGCTTGGCGGCGATGGTATCGGAGTATCTTTCGGCTGAGGGCTA
TGCGGTCGCCAGCCGGTTCACTGCGCGGGAGGGCCACGATGCCCTCCGGCGCGAGCGGTTCGATGCCGTGATCCTCGATG
TCATGCTGCCGGATTGCGACGGGTTCGAGCTGTGTCGGCAGATCCGAACGCACTCCGGCGTCCCGATCCTGATGCTGACC
GCCAAAGGCGACGACACCGACCGCATCATCGGGCTGGAGATCGGCGCCGACGACTACCTGCCCAAGCCGTTCAACCCGCG
TGAACTCCTGGCGCGCATCCGCGCGCTGCTGCGTCGGCAGCGCGCCCCGCAAGAGGCCGCGCTGCTCGATTTCGGGCGTC
TGCAGATCGATCCGAGTTCGCGCGTCGTGCGGCTCGACGGGGTGGAGCGCCGGCTCACCAGCCATCAGTTCGACCTCCTG
CTCGCCTTTGCGACCAATGCTGGGCGCGTACTGAGCCGCGAGCGGCTGATGGATCTGGTCAAGGGCGAAGAGTTGGACGC
CTTGGACCGGTCCATCGACGTCCATGTGTCCCGCCTGCGGGCAGTGATCGAGGATGATCCCCGGCATCCGCGGCGGCTCA
TCACCATTCGGGGCGCCGGCTACGTCTTCGCCCGCCAGCAGGACGCCGAGCGATGA

Protein sequence : 
MAERLLIIDDDRRLAAMVSEYLSAEGYAVASRFTAREGHDALRRERFDAVILDVMLPDCDGFELCRQIRTHSGVPILMLT
AKGDDTDRIIGLEIGADDYLPKPFNPRELLARIRALLRRQRAPQEAALLDFGRLQIDPSSRVVRLDGVERRLTSHQFDLL
LAFATNAGRVLSRERLMDLVKGEELDALDRSIDVHVSRLRAVIEDDPRHPRRLITIRGAGYVFARQQDAER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 5e-30 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mnod_8578 YP_002495156.1 winged helix family two component transcriptional regulator CP000034.1.gene3671. Protein 2e-38 43
Mnod_8578 YP_002495156.1 winged helix family two component transcriptional regulator CP000675.2.gene1535. Protein 8e-31 42
Mnod_8578 YP_002495156.1 winged helix family two component transcriptional regulator CP001485.1.gene721.p Protein 3e-25 41
Mnod_8578 YP_002495156.1 winged helix family two component transcriptional regulator BAC0347 Protein 4e-19 41
Mnod_8578 YP_002495156.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 3e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mnod_8578 YP_002495156.1 winged helix family two component transcriptional regulator VFG1390 Protein 2e-24 42
Mnod_8578 YP_002495156.1 winged helix family two component transcriptional regulator VFG1563 Protein 3e-30 41
Mnod_8578 YP_002495156.1 winged helix family two component transcriptional regulator VFG1702 Protein 1e-29 41