Gene Information

Name : A2cp1_0720 (A2cp1_0720)
Accession : YP_002491141.1
Strain : Anaeromyxobacter dehalogenans 2CP-1
Genome accession: NC_011891
Putative virulence/resistance : Virulence
Product : general secretory pathway protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 808281 - 810080 bp
Length : 1800 bp
Strand : -
Note : KEGG: ank:AnaeK_0719 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase

DNA sequence :
ATGCCCAACGACGCACAGATCGACAACGCCCGGGCCGCCGTCCAGGGCGCCATCCCCGGGCTCGCCGCCGCGGCCGGGCT
CGCCGGCCGTCCCATCGGCGAGATCCTCCGGGAGACGGCCGGGCTGGACCCGGCGCGCCTCGAGGAGGCGCTCGCGCTGC
AGCAGGGCGAGCAGGCCGGCCAGCGCCTCGGCGAGATCCTCGTCCGCCTGAGGGCGGTCACCGAGGAGGACGTGCTGCGC
GCGCTCGCGGCCCAGCTCGACCTGCCGTTCGTCGAGCGCATCGACCCGGAGTCGGTGCCGGGCGACCTCGCGGCCAAGGT
GCCGATCCACTTCGCCAAGCAGTCGAAGGTGCTGCCGCTCGGCACCGCCGGTGACGCGGTCCGGGTGGCGGTGGGCGACC
CGCTCGACACCGCCGCGCAGGACTCGGTGTCCATGCTGCTCGGCGCCGCGGTGGCGCCGGAGGTGGCGCCGCCGCAGGTG
GTGCTCGACGCCATCAACGCGGTGTACGACCGCGCCGCCGACGAGCACGACAAGCTCATGGAGGACCTCGAGACCGAGGA
CCTCGAGAGCGTCGCGCACGAGCTGCAGGAGCCGACCGACCTCCTCGAGGCGGACGACGAGGCGCCCATCATCCGCCTGG
TCAACTCGCTCCTGTTCCGCGCGGTGAAGGAGCGCGCCAGCGACATCCACATCCTCCCGGAGGAGAAGGACATCTCGGTG
CGCTACCGGATCGACGGCGTGCTCCGCGAGGTGATCCGCCCTCCCAAGCGCTTCCAGGCGTCCATCGGCAGCCGCATCAA
GATCATGGGCGGGCTGAACATCGCCGAGAAGCGGCTCCCGCAGGACGGCCGCATCCGCATCAAGATCGCCGGCAAGGACG
TGGACATCCGCCTGTCCACCGTCCCCACCGCGCACGGCGAGCGCATCGTGATGCGCCTCCTCGACAAGTCCAACGTGGTG
CTGGACCTGGCCGAGCTCGGCTTCGAGGACTGGCAGCTCAAGGTGATGGACACGCTCATCACCCGCTCGCACGGCATCGT
GCTGGTCACCGGCCCGACCGGCTCCGGCAAGACCACGACGCTCTACGCGGCGCTCGCGAAGATCAACTCGCCCGACCTGA
ACATCCTCACCATCGAGGATCCGGTCGAGATCCCGCTGAAGGGCGTGGGGCAGGTGCAGATCAACCCGAAGATCGACCTG
ACCTTCGCGAGCGGGCTGCGCTCGTTCCTCCGGCAGGACCCGGACGTCATCATGGTCGGCGAGATCCGCGACCTGGAGAC
CGCCGAGATCGCGATCCAGGCCTCGCTCACCGGCCACCTGGTGCTCTCCACCGTGCACACCAACGACGCCGCCGGGGCCA
TCACGCGCCTGGTGGACATGGGCGTGCAGCCGTTCCTGGTGGCGTCCTCGCTGGTGGGCGTGCTGGCGCAGCGCCTGGTG
CGCGTGCTCTGCCCGACGTGCAAGAAGCCCTACGTCCCCACCGCCGAGGAGCGCGACCTCGCCGGGCTCACGCCCGAGAT
CCTGCGCCAGGCCGGCGACCCGACCCACCTCTACAAGGCGGTGGGGTGCCCGGCCTGCAACCACACCGGCTACCAGGGCC
GGACCGGCATCTACGAGCTGATGATGGTGGACGACGACGTCCGCCCGCTCATCCTCAAGTCGGTGGACGCCACCACCATC
AAGCGCGCCGCCGTCGAGCGCGGGATGGTGACGCTCATGGAGCACGGCGCGTACAAGGTCGCGCGCGGCATCACCACCGC
GGCCGAGGTGCTGTCGGTCACCGCGGAGGACATCCGGTGA

Protein sequence :
MPNDAQIDNARAAVQGAIPGLAAAAGLAGRPIGEILRETAGLDPARLEEALALQQGEQAGQRLGEILVRLRAVTEEDVLR
ALAAQLDLPFVERIDPESVPGDLAAKVPIHFAKQSKVLPLGTAGDAVRVAVGDPLDTAAQDSVSMLLGAAVAPEVAPPQV
VLDAINAVYDRAADEHDKLMEDLETEDLESVAHELQEPTDLLEADDEAPIIRLVNSLLFRAVKERASDIHILPEEKDISV
RYRIDGVLREVIRPPKRFQASIGSRIKIMGGLNIAEKRLPQDGRIRIKIAGKDVDIRLSTVPTAHGERIVMRLLDKSNVV
LDLAELGFEDWQLKVMDTLITRSHGIVLVTGPTGSGKTTTLYAALAKINSPDLNILTIEDPVEIPLKGVGQVQINPKIDL
TFASGLRSFLRQDPDVIMVGEIRDLETAEIAIQASLTGHLVLSTVHTNDAAGAITRLVDMGVQPFLVASSLVGVLAQRLV
RVLCPTCKKPYVPTAEERDLAGLTPEILRQAGDPTHLYKAVGCPACNHTGYQGRTGIYELMMVDDDVRPLILKSVDATTI
KRAAVERGMVTLMEHGAYKVARGITTAAEVLSVTAEDIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-103 53
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 2e-103 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A2cp1_0720 YP_002491141.1 general secretory pathway protein E VFG0182 Protein 1e-112 55
A2cp1_0720 YP_002491141.1 general secretory pathway protein E VFG2048 Protein 4e-104 52