|
Name : A2cp1_0387 (A2cp1_0387) Accession : YP_002490810.1 Strain : Anaeromyxobacter dehalogenans 2CP-1 Genome accession: NC_011891 Putative virulence/resistance : Unknown Product : Fis family proprionate catabolism activator Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 433458 - 435416 bp Length : 1959 bp Strand : - Note : KEGG: ank:AnaeK_0385 proprionate catabolism activator, fis family; TIGRFAM: PAS sensor protein; propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabo DNA sequence : GTGACCCCCGCCGACCGCCGCCCCATCGTCTGGGCGTTCAGCACGAGCCGACTCCGGCACGTGTTCGAGAGCGTCGCGCC CTTGATGGCGGACGTGGCCGAGGTCCGGGTCTTCGACAAGGGGTTCGAGGAGGCGCTCCAGGTCGCGCGCGAGCTCCGGC AGGCCGGCGAGGAGGTGGACGCGTTCGTGGCGGCCGGCACCAACGGCGCCTACCTGCGCGACCACGCGGACGTGCCGGTG GTGGTGGTGACCGCCTCGACCGTGGACGCGCTCCAGGCGCTGGTGCAGGCGCGCAAGCTCTCGAAGCGCATCGGCGTGGT GAACTTCCGGCGCACGGTGGCGGGCCTCGAGGGCGTGCACCTCATCGACGACACCGTCATCGAGCAGCGGCCCTACGTGA CGCCGGAGGAAGGGCAGGCCGCGGTGGACGACCTCTCCGCGCGCGGCTTCAAGGTCATCGTCGGCCCGGGGCCCATCTGC TCGGTCGCGGAGCGCTCCGGCCTGCGCGCCGTGCTGCTGTACGGCCAGGACTCGCTGGAAGAGGCGATCCGCCAGGCCGC CGAGGTGGCGCGCATCGCGCGCGTCGAGGGCTCGCGGCGCACACACCTCCAGGCGATGTTCCAGCACCTCGAGGTCGGGG TGGTGGCGGTGGACACCGAGGAGCGCATCCAGGCCATCAACCCGGCGCTGCAGCGGCTGCTCGGCGTCACCGCGGCCGAG GTGCAGGGGCGCAAGCTCTCCGCGGTCGCGCCCGAGCTGGCCATGGGCCCGGTGCTGGAGGGCGGCCCGCCGGAGGTCGA GGCGGTGCAGCGCATCGGCGTCGCCGCCGCGGTGGTGAGCCGGTTCCCGCTGCACGAGCACGGCGTCCTGCGCGGCGCGG TGCTCACCTGCCAGCCCGCCGCGATGGTCCAGCGGCTCGAGCGCGGGCTCCGCTCCACGCACCGCCCGCCGCGGTTCGTG GCGCGGTACGCGCTCTCCGGCCTGGTGGGCGAGTCGCCGGCGATGGTCCGGCTGCGCGAGCTCGCCGGCCGCTACGCGCG CACCGACGCCACCGTGCTCATCACCGGCGAGAGCGGCACCGGCAAGGAGATGGTGGCGCAGGGCATCCACGGCGCGAGCC GCCGGCGCGACCGGCCGTTCGTGGCGGTGAACTGCGCCGCGTTCCCGGAGACGCTGCTCGAGGCCGAGCTGTTCGGCTAC GAGGAGGGCGCGTTCACCGGCTCGCGGCGCGGCGGGCGCCCCGGCCTGTTCGAGGCGGCGCACACCGGCACGCTGTTCCT CGACGAGATCGGCGACGTGCCGGTCACGCTGCAGACGCGGCTCCTGCGCGTCCTGCAGGAGCGGCAGGTGCTCCGGCTCG GCAGCAACGATCCCACCCCGGTGGACGTGCGCGTCATCGCCGCGACGCACCGCGACCTCCGGCAGGCCATCGCGCGCGGC GAGTTCCGCGAGGACCTCTACTACCGCCTCGACATCCTCCCGCTGCACCTGCCGCCGCTGCGCGAGCGGGGCGAGGCGGA CGTCGAGCTCATCGCCTCCGACCTGCTGAAGCGCGCCCTCCTCCGCCATGGCGCCGCCGACGCGCACCGGCGCGCGCTCT CCATGGTGCTGCCGCGGCTGCGCGGACACGCCTGGCCCGGGAACGTGCGCGAGCTCGAGAACGTGCTCGAGCGCGTGGCG GTGCTGTTCGCGGACCGCGACCCGCGCGCGCGCGTGACCGAGGAGGAGCTCGCCGCGGTGATGCCGGAGGTCGCGGATCC GACCGCCCGCGCCGCCGCGCCCACCGCTCCCTCCGCGGTCGCCCCGCCCATCGACCTCCGCCTCGCCCGCGCCGCCCAGG AGCGGGTCCTCATCGAGCGGACCGTGGCCGAGTGCGGCGGCAACCAGGCCGAGGCCGCCCGCCGGCTCGGCATCGGGCGG ACCACGCTGTACCGGAAGCTCGGGAGGGTCAGGGCGTAG Protein sequence : MTPADRRPIVWAFSTSRLRHVFESVAPLMADVAEVRVFDKGFEEALQVARELRQAGEEVDAFVAAGTNGAYLRDHADVPV VVVTASTVDALQALVQARKLSKRIGVVNFRRTVAGLEGVHLIDDTVIEQRPYVTPEEGQAAVDDLSARGFKVIVGPGPIC SVAERSGLRAVLLYGQDSLEEAIRQAAEVARIARVEGSRRTHLQAMFQHLEVGVVAVDTEERIQAINPALQRLLGVTAAE VQGRKLSAVAPELAMGPVLEGGPPEVEAVQRIGVAAAVVSRFPLHEHGVLRGAVLTCQPAAMVQRLERGLRSTHRPPRFV ARYALSGLVGESPAMVRLRELAGRYARTDATVLITGESGTGKEMVAQGIHGASRRRDRPFVAVNCAAFPETLLEAELFGY EEGAFTGSRRGGRPGLFEAAHTGTLFLDEIGDVPVTLQTRLLRVLQERQVLRLGSNDPTPVDVRVIAATHRDLRQAIARG EFREDLYYRLDILPLHLPPLRERGEADVELIASDLLKRALLRHGAADAHRRALSMVLPRLRGHAWPGNVRELENVLERVA VLFADRDPRARVTEEELAAVMPEVADPTARAAAPTAPSAVAPPIDLRLARAAQERVLIERTVAECGGNQAEAARRLGIGR TTLYRKLGRVRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 3e-104 | 48 |
