Gene Information

Name : A2cp1_3692 (A2cp1_3692)
Accession : YP_002494084.1
Strain : Anaeromyxobacter dehalogenans 2CP-1
Genome accession: NC_011891
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 4108852 - 4109631 bp
Length : 780 bp
Strand : -
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: ank:AnaeK_1327 IstB domain protein ATP-binding protein

DNA sequence :
GTGAGCACCGAGATCACGCGGGCTCGCGTCCTCGAGAGCCTCGGCCGGCTCCGCCTCGGGCGCATCGGCGAGCAGCTCGA
CGCGTTGCTTTCGACCGCGGCACGGGGCGAGCCGACGTACCTCGACTTCCTCGACACGATCCTGCGCGAGGAGGTCGGGG
CGAAGCAGCGGAAGCGCGTCGCGATGGGCATCCAGATCGCGCACTTCCCCGCGGTGAAGACCCTCGACGACTTCGACTTC
AAGTTCCAGCCGAGCGTCGACCAGAAGCTCGTCCGCGAGCTCGCCGTCAGCCGGTACGTCGCGAACGCGGAGAACGTGCT
CGTGTTCGGCCCGCCCGGCGTCGGCAAGACGCACCTCGCCATCGGGCTCGGGCGCGCCGCAGTCGAAGCCGGCTACACCG
TGCTCTTCACGAGCGCGACGGCGTTGCTGGGCGCGCTCTCGAAGGCCGAGACCGAGGGCCAGCTCGCGGAGCGGCTCGCG
TTCTACGCGAAGCCCAAGCTGCTCGTCGTGGACGAGCTGGGGTACCTGCCGTTCGAGAAGCGCAGTGCGCACCTGTTCTT
CCAGCTCATCGCGAGGCGGTACGAGAAGGGCGCGATGATCATCACGACGAACCAGGTCGTCACGCAGTGGGGCACCGTGT
TCGGGGACGAGATCCTCGCCGCCGCGATCCTCGACCGGCTCCTGCACCACAGCTTCACGCTGATGATCCAGGGCGAGAGC
TACAGGCTGAAGCAGAAGCGCAAGGCGGGCCTGCTCGGCAGGGCCGAGAAGGCGAACTGA

Protein sequence :
MSTEITRARVLESLGRLRLGRIGEQLDALLSTAARGEPTYLDFLDTILREEVGAKQRKRVAMGIQIAHFPAVKTLDDFDF
KFQPSVDQKLVRELAVSRYVANAENVLVFGPPGVGKTHLAIGLGRAAVEAGYTVLFTSATALLGALSKAETEGQLAERLA
FYAKPKLLVVDELGYLPFEKRSAHLFFQLIARRYEKGAMIITTNQVVTQWGTVFGDEILAAAILDRLLHHSFTLMIQGES
YRLKQKRKAGLLGRAEKAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 7e-38 48
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 2e-49 46
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 2e-49 46
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 2e-49 46
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 3e-49 46
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 2e-49 46
unnamed CAA21402.1 - Not tested HPI Protein 3e-49 46
api84 CAF28558.1 putative transposase Not tested YAPI Protein 2e-49 46
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-49 46
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 1e-49 45
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 1e-49 45
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 2e-49 45
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-48 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A2cp1_3692 YP_002494084.1 IstB domain-containing protein ATP-binding protein VFG1460 Protein 4e-38 48
A2cp1_3692 YP_002494084.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 1e-49 46
A2cp1_3692 YP_002494084.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 1e-49 46
A2cp1_3692 YP_002494084.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 1e-49 46
A2cp1_3692 YP_002494084.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 8e-49 45