Gene Information

Name : A2cp1_2355 (A2cp1_2355)
Accession : YP_002492759.1
Strain : Anaeromyxobacter dehalogenans 2CP-1
Genome accession: NC_011891
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.15
Position : 2608285 - 2609592 bp
Length : 1308 bp
Strand : -
Note : KEGG: ank:AnaeK_2267 ATPase, FliI/YscN family; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase

DNA sequence :
GTGACCGTGGACCTGGGGCGGGTGCGCGCCGCGCTCGGGGAGGCCGCGCCGCTGCCGCTGCGCGGGCGGGTGACCCGCCT
GACCGGCCTGGTGCTGGAGGCGGCGGTGGGCGGCGTGCGGCAGGGCGAGGCGGTGGAGATCCGCGCGCCCGGGCGCGAGC
CGCTGCAGGCGGAGGTGGTCGGCCTGCGCGACGACCGGGCGGTGCTGGTGCCGTTCGGCGACCTCGGCGGCGTCGGCCTC
GACGCGGAGGTCGTCCCGACCGGCCGCGCGCACACCATCCGCGCCGGGCCTGGGCTGCTGGGGCGGGTGCTGGACGGCCT
GGGCCGGCCGCTCGACGGCGCGCCGCTGCCGGCCGGGCTGGAGGAGTGGGCGGTGGATCGGCCCGCGCCGAACCCGCTCG
CGCGCCGCCCGGTGGCGGCGCCGCTCCCGCTCGGCGTCCGGGTGCTGGACGGGTTCCTCACCGCCGGCGAGGGGCAGCGG
ATCGGGCTGTTCGCCGGCTCCGGCGTGGGGAAGTCCACGCTCCTCGGCCAGCTCGCCCGCGGCGCGCGCGCCGACCTGTG
CGTGGTGTGCCTGGTGGGCGAGCGCGGGCGCGAGGTGCGCGAGTTCCTGGAGGGCCCGCTGGGCGCGGAGGGCCTGGCCC
GCAGCGTGGTGGTGGCGGCCACCAGCGACGCGCCGGCGCTGGTGCGCCTGAAGGCGGCGCACGTGGCCACCGCGGTGGCG
GAGTGGTTCGCGGAGCGCGGCGACCGGGTGCTGCTCCTGGTGGACTCGGTGACCCGCTACGCCCGCGCGCTCCGCGAGGT
CGGGCTCGCGGCGGGCGAGCCGCCGGCGCGCCAGGGCTACCCGCCCTCGGTGTTCGCGGCGCTCCCGCGGTTGCTGGAGC
GGGCCGGCAACCGCGCCCGCGGCGGGATCACCGCCGTGTACACGGTGCTCGTGGCGGGCGGCGACCTCGAGGAGCCGATC
GCCGACGAGGTCCGCGGCATCCTCGACGGCCACGTGGTGCTCGACCGCGCCGTGGCGTCCGGCGGCCGCTTCCCCGCGGT
GGACCCGCTGCAGAGCCTTTCGCGCGTCATGCCGGCGGTGGCGGCCCCGGCGCACCTGGCGGCGGCGGGCCGGGTGCGGG
CGCTGCTCGCGGCGCACGCCCGGGTGCGCGACCTGGTGGCGCTCGGCGCCTACCGGGCCGGCGCGGATCCCGAGGCGGAC
CTGGCCCTGGCCCGGCTGCCGGCGATCGAGGCGTTCCTCCGGCAGCCGCTCGGCGAGGCGGCGCCGTTCGAGGAGACGCT
CCGGCGGCTCGAGGCGCTGGCTGGGTGA

Protein sequence :
MTVDLGRVRAALGEAAPLPLRGRVTRLTGLVLEAAVGGVRQGEAVEIRAPGREPLQAEVVGLRDDRAVLVPFGDLGGVGL
DAEVVPTGRAHTIRAGPGLLGRVLDGLGRPLDGAPLPAGLEEWAVDRPAPNPLARRPVAAPLPLGVRVLDGFLTAGEGQR
IGLFAGSGVGKSTLLGQLARGARADLCVVCLVGERGREVREFLEGPLGAEGLARSVVVAATSDAPALVRLKAAHVATAVA
EWFAERGDRVLLLVDSVTRYARALREVGLAAGEPPARQGYPPSVFAALPRLLERAGNRARGGITAVYTVLVAGGDLEEPI
ADEVRGILDGHVVLDRAVASGGRFPAVDPLQSLSRVMPAVAAPAHLAAAGRVRALLAAHARVRDLVALGAYRAGADPEAD
LALARLPAIEAFLRQPLGEAAPFEETLRRLEALAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 3e-76 53
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-70 53
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 9e-70 53
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 3e-70 53
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 3e-70 53
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-69 53
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 4e-71 53
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-70 53
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 3e-66 52
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-70 49
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-70 49
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-51 47
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 7e-58 47
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-58 47
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 8e-58 47
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-58 47
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-57 47
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-53 46
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-53 46
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 4e-53 46
invC AAS66861.1 InvC Not tested SSR-2 Protein 1e-54 45
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 3e-56 44
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 3e-56 44
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 3e-56 44
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 3e-56 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 3e-59 43
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 9e-57 43
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 8e-57 43
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-56 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A2cp1_2355 YP_002492759.1 FliI/YscN family ATPase VFG0192 Protein 3e-77 54
A2cp1_2355 YP_002492759.1 FliI/YscN family ATPase VFG0390 Protein 2e-78 53
A2cp1_2355 YP_002492759.1 FliI/YscN family ATPase VFG1254 Protein 6e-67 49
A2cp1_2355 YP_002492759.1 FliI/YscN family ATPase VFG2499 Protein 9e-61 48
A2cp1_2355 YP_002492759.1 FliI/YscN family ATPase VFG0515 Protein 4e-58 47
A2cp1_2355 YP_002492759.1 FliI/YscN family ATPase VFG2144 Protein 7e-75 46
A2cp1_2355 YP_002492759.1 FliI/YscN family ATPase VFG0555 Protein 1e-56 44