Gene Information

Name : A2cp1_2258 (A2cp1_2258)
Accession : YP_002492662.1
Strain : Anaeromyxobacter dehalogenans 2CP-1
Genome accession: NC_011891
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2507903 - 2508799 bp
Length : 897 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: ank:AnaeK_2169 tyrosine recombinase XerD

DNA sequence :
ATGTCCGCGCTGGAGCCCGCCCTCGACCTGTTCCTCGCCCACGTGCGCGTGGAGAAGGGGCTCGCCGAGAACAGCGTCGA
GGCCTACGGGCGCGACCTGCGCCGCTACCTCGAGCACCTGGACGAGCTGGGGGTGGACGCCTGGGAGCGGGTGGGCCGCG
GCGAGATCCAGGCCCACCTCGCCGAGCTGGTGCGCCGCGGTCTCTCGCCGCGCTCGCAGGCGCGGGCGCTCTCCGCCATC
CGCTCGCTGCACCGGCTCCTCGCGGCCGAGCGCGTCACTCCCGCCGATCCGTCGGACGAGATCGAGTCGCCGCGGCCCGG
GCGCCGCCTCCCGGGGCTGCTCTCGCACGACGAGGTGGACCGCCTGCTGGCCGCGCCGGACGTGCGCAGCGCCGCCGGCA
TCCGCGACCGCGCCATGCTGGAGCTGCTCTACGCGACCGGGCTGCGCGTCTCGGAGCTGGTCTCGCTGCAGCTCAACGAC
GTGAACCTCGAGACGCGGGTGCTCGTCGCCCGCGGCAAGGGGAACAAGGAGCGGATCGTGCCGGTGGGCGCGCCCGCCGC
CGCGGCGGTGAAGGCGTACCTGGCGGTCGCGCGGGAGCGGCTGCTCCACGGCCGCCGCTCGAAGGACCTGTTCGTCACGC
CGCGGGGCGGCCGGATGACGCGGCAGGGGTTCGCGAAGATCCTGGACCGCTGCGCCCGGCGCGCGGGCATCCGCCGGCGC
ATCTCACCGCACAAGCTGCGCCACTCGTTCGCCACCCACCTGCTGGAGGGGGGCGCCGACCTGCGCGCGGTCCAGGAGAT
GCTGGGCCACGCCGACGTCTCCACCACGCAGATCTACACCCACGTGGATCGCACCCACGTGAAGCGGCTGTACGACCGCT
TCCACCCCCGCGCCTGA

Protein sequence :
MSALEPALDLFLAHVRVEKGLAENSVEAYGRDLRRYLEHLDELGVDAWERVGRGEIQAHLAELVRRGLSPRSQARALSAI
RSLHRLLAAERVTPADPSDEIESPRPGRRLPGLLSHDEVDRLLAAPDVRSAAGIRDRAMLELLYATGLRVSELVSLQLND
VNLETRVLVARGKGNKERIVPVGAPAAAAVKAYLAVARERLLHGRRSKDLFVTPRGGRMTRQGFAKILDRCARRAGIRRR
ISPHKLRHSFATHLLEGGADLRAVQEMLGHADVSTTQIYTHVDRTHVKRLYDRFHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 8e-41 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 8e-41 44