Gene Information

Name : A2cp1_1206 (A2cp1_1206)
Accession : YP_002491616.1
Strain : Anaeromyxobacter dehalogenans 2CP-1
Genome accession: NC_011891
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : 6.1.1.6
Position : 1354123 - 1355664 bp
Length : 1542 bp
Strand : +
Note : KEGG: ank:AnaeK_1137 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type

DNA sequence :
ATGGCCGACGAACTTGGAACGACCGAGCGCGAGATCATCGCGCAGCGTCTGAAGAAGGCCGAGGCGCTCCGCGCCCTCGG
CGTGAACCCCTTCGGAAACGGCTGGCAGCCCCGCCACCTCGCCGACGAGCTGCTGCGCCACTACGGCGACCAGCCCGCCG
AGGAGATCGCGAAGGACCCCGGCGACTGGTCGCTCGCCGGTCGCGTCCTGGCGGTCCGCTCCTTCGGCAAGGCCGCGTTC
CTGCGCGTCCGCGACCGCTCCGCCGAGCTCCAGGTGTGGGTGAAGAAGGATCGCGTGGGCGAGCAGGCGTTCGAGGTCTT
CAAGCTGCTCGACATCGGCGACATCGTGGGCGCGGAGGGGCCGGCGACCCGCACCAAGACCGGCGAGCTGACGCTGGAGG
CGCGGACGTTCACCATCCTCACCAAGGCGACGCGCCCGCTGCCGGAGAAGTGGCACGGCCTCACCGACGTGGAGCAGCGC
TACCGCCAGCGCTACGTGGACCTGGTGGTGACGCCCGGCGTGCGCGAGGCGTTCGTGAAGCGCGCCCGCATCGTCTCCGG
GATCCGCCGCTTCCTGGACGCGCGCGGCTACCTCGAGGTGGAGACGCCCACGCTGCACAAGCCGGAGGAGGCCGGCGGCG
CGGCCGCGCGGCCGTTCGAGACGCACCACAACGCGCTCGACCTGGACCTGAAGCTCCGCATCGCCACCGAGCTGCACCTG
AAGCGCCTCGTGGTGGGCGGCCTGGATCGCGTGTACGAGATCGGCCGGATCTGGCGCAACGAGGGGATCGACCGGCGCCA
CAACCCGGAGTTCACCTCGATCGAGTTCTACCAGGCGTACGCCACCCACGAGGACCTGATGCGCCTCACCGAGGAGCTGA
TGCACCGGCTCGCGGTGGAGGTGACCGGCGGGCCGGTGGTGACGTTCCAGGGCCAGGCCATCGACCTGACCCCGCCGTTC
CCGCGCGTCTCCATGCTGGAGGTGGGCGCGCGAGCGCTGGGGCTGTCGCCGGACGACGCGCTGGCCGGCCGCGGCCTCGC
CGAGGCGCTCTCGCGCGCGGCGGCGCGCGAGAACGACTCCGAGGACGCCTGGAAGCTGGAGCAGGCCGCGAAGAAGACGC
CGGGCGAGGCGGTGGCGCTCGCGTTCGAGATCTTCGGCGAGCCGCAGCTCCCGAAGGACCGGCCCGCGTTCGTGGTGGAC
TTCCCGCTCGAGACGAGCCCGCTCTCCCGCCGGCGCGACGCCGACCCCCGGCTGGTGGACCGCTTCGAGCTGTTCGCCGC
GGGCATGGAGCTCGCGAACGCGTTCTCCGAGCTGAACGACCCGGCCGACCAGCGCGCGCGGTTCGAGGCGCAGATGCGCG
CCAAGGCCGCCGGCGACGAGGAGGCCATGCCCTACGACGAGGACTTCGTCCGCGCGCTGGAGCACGGCATGCCGCCCACC
GCGGGCGAGGGGATCGGCATCGATCGCCTGGCCATGCTCTTCACCGACTCGGCGTCCATCCGCGACGTGATCCTGTTCCC
GCTGCTGAAGTCCCGCGACTGA

Protein sequence :
MADELGTTEREIIAQRLKKAEALRALGVNPFGNGWQPRHLADELLRHYGDQPAEEIAKDPGDWSLAGRVLAVRSFGKAAF
LRVRDRSAELQVWVKKDRVGEQAFEVFKLLDIGDIVGAEGPATRTKTGELTLEARTFTILTKATRPLPEKWHGLTDVEQR
YRQRYVDLVVTPGVREAFVKRARIVSGIRRFLDARGYLEVETPTLHKPEEAGGAAARPFETHHNALDLDLKLRIATELHL
KRLVVGGLDRVYEIGRIWRNEGIDRRHNPEFTSIEFYQAYATHEDLMRLTEELMHRLAVEVTGGPVVTFQGQAIDLTPPF
PRVSMLEVGARALGLSPDDALAGRGLAEALSRAAARENDSEDAWKLEQAAKKTPGEAVALAFEIFGEPQLPKDRPAFVVD
FPLETSPLSRRRDADPRLVDRFELFAAGMELANAFSELNDPADQRARFEAQMRAKAAGDEEAMPYDEDFVRALEHGMPPT
AGEGIGIDRLAMLFTDSASIRDVILFPLLKSRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-96 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A2cp1_1206 YP_002491616.1 lysyl-tRNA synthetase VFG1668 Protein 8e-97 43