Gene Information

Name : Cyan7425_4704 (Cyan7425_4704)
Accession : YP_002485370.1
Strain : Cyanothece sp. PCC 7425
Genome accession: NC_011884
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 4792176 - 4794653 bp
Length : 2478 bp
Strand : +
Note : PFAM: UvrB/UvrC protein; ATPase AAA central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: ATPase AAA; KEGG: tel:tll0307 ATP-dependent Clp protease regulatory subunit

DNA sequence :
ATGTTTGAACGCTTCACAGAAAAAGCCATTAAGGTGATCATGCTGGCCCAAGAGGAAGCCCGCCGTTTGGGACACAACTT
TGTGGGTACAGAGCAGATCCTCCTGGGTCTGATTGGGGAAGGAACCGGCGTTGCTGCCAAAGTGTTGAAGTCGATGGGGG
TCAACCTCAAGGATGCCCGGATCGAGGTCGAAAAAATTATCGGTCGCGGTTCCGGGTTTGTGGCGGTGGAAATTCCCTTT
ACTCCTAGAGCAAAGCGAGTTCTGGAACTGTCCCTGGAAGAGGCCCGCCAGTTGGGACACAACTACATTGGCACCGAACA
CCTGTTACTTGGATTGATTCGAGAAGGAGAGGGCGTCGCTGCCAGGGTGTTAGAAAACCTGGGGGTTGATCTCTCTAAAG
TTCGCACTCAGGTGATTCGGATGCTGGGTGAGACCGCTGAAGTCTCTGCCGGAAGTAGCCAGGGGCGGACAAAAACCCCA
ACCCTGGATGAGTTTGGATCTAACCTGACCCAGATGGCCGCCGATGGAAAGCTTGATCCAGTTGTCGGCCGCCAGAAAGA
AATTGAGCGGGTAATTCAAATTCTGGGCCGGCGGACGAAAAACAATCCGGTGCTGATTGGCGAACCGGGGGTGGGAAAAA
CGGCGATCGCCGAAGGATTGGCCCAGCGGATTGCCAACGGCGATATTCCGGACATCCTGCAGGAGAAGCGGGTGGTCACT
CTAGACATTGGTCTGCTGGTCGCGGGCACCAAATATCGGGGTGAATTTGAAGAACGCTTGAAAAAAATTATGGATGAGAT
CCGCTCTGCCGGTAATGTCATCCTGGTGATCGATGAAGTCCATACCCTGATTGGGGCGGGGGCCGCTGAAGGGGCGATCG
ATGCCGCAAATATCCTCAAACCCGCCCTGGCCCGAGGTGAACTCCAGTGTATTGGGGCCACCACCCTGGATGAGTACCGT
AAGCACATCGAACGGGACGCAGCCCTGGAACGCCGTTTCCAACCCGTGATGGTGGGTGAACCCTCTGTGGAAGAAACGAT
CGAAATCCTCTATGGGCTGCGGGAACGCTACGAAAAACACCACAAGCTCAAAATTCTGGACGAAGCCCTGGAAGCGGCTG
CCAAGCTGTCGGATCGCTATATTTCCGATCGCTATCTGCCGGACAAGGCGATCGACCTGATCGATGAAGCTGGTTCCCGT
GTCCGCCTGATCAATTCCCAACTGCCTCCCGCAGCGAAGGAGCTGGACAAAGAACTACGGCAAGTCCTGAAAGAAAAAGA
TGACGCCGTACGGGCCCAGGACTTTGATAAGGCTGGGGAACTGCGGGATCGGGAAATGGAAATCAAAGCCGAAATTCGCG
CCCTCTCCCAGCAGAAGAAAGCCGAAACCACCAGCGAAGATGAAGCCCAATCCCCCGTGGTCAGTGAAGAAGACATTGCC
CACATTGTCGCCTCCTGGACAGGTGTGCCGGTGAACAAGCTGACGGAATCGGAATCCGAAAAACTGCTGCACATGGAAGA
TACCCTGCACCAGCGCATTATTGGTCAGGATGAAGCCGTCAAAGCGATTTCGCGCGCCATTCGTCGGGCCAGAGTCGGTC
TGAAAAACCCCAACCGTCCGATCGCCAGCTTTATCTTTTCTGGACCCACTGGAGTTGGCAAGACCGAACTGGCCAAAGCC
CTGGCTGCCTACTTCTTTGGTTCTGAAGAAGCGATGATCCGGCTGGATATGTCAGAGTACATGGAGCGGCATACCGTTTC
CAAACTGATCGGTTCCCCTCCTGGCTATGTTGGCTACAACGAAGGGGGACAACTGACAGAAGCGGTGCGGCGGCGTCCCT
ATACCGTGGTGCTGTTCGACGAAATCGAAAAAGCCCACCCGGATGTCTTCAACATGCTGCTGCAAATCCTGGAAGATGGC
CGTCTTACCGATGCCAAAGGTCGGACAGTGGACTTCAAGAACACCCTGCTGATCATGACCTCCAACATTGGCTCTAAGGT
GATTGAGAAAGGTGGCGGTGGACTCGGGTTTGAGTTCTCTGGTGCCGGTGAAGCCGATTCTCAGTACAACCGGATTCGCT
CCCTGGTGAACGAAGAGCTGAAACAATACTTCCGCCCAGAGTTCCTCAACCGTCTGGACGAGATCATTGTCTTCCGGCAA
TTGACCCGCGATGAGGTGAAGGAAATCGCCGACATTCTGCTCAAGGAAGTCTTTAGCCGCCTGACCGAACAGGGCATCAC
CCTGGAAGTGACGGCCCGGTTTAAGGATCGCCTGGTGGATGAAGGCTACAATCCCAGCTACGGAGCCAGACCCCTACGTC
GCGCCATTATGCGTCTCCTGGAAGACAGCCTGGCAGAGGAAATTCTTTCTGGCCGGGTGAAGGAAGGGGATACGGCGATC
GTCGATGTAGATGGCGATGGCCAGATCAAAGTCCTGCAGGGCGAAACGCGAGAATTGCTGCCCCAGGCCGTGGAGTAG

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVSAGSSQGRTKTP
TLDEFGSNLTQMAADGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANGDIPDILQEKRVVT
LDIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR
KHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEKHHKLKILDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSR
VRLINSQLPPAAKELDKELRQVLKEKDDAVRAQDFDKAGELRDREMEIKAEIRALSQQKKAETTSEDEAQSPVVSEEDIA
HIVASWTGVPVNKLTESESEKLLHMEDTLHQRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKA
LAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDG
RLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGAGEADSQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ
LTRDEVKEIADILLKEVFSRLTEQGITLEVTARFKDRLVDEGYNPSYGARPLRRAIMRLLEDSLAEEILSGRVKEGDTAI
VDVDGDGQIKVLQGETRELLPQAVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan7425_4704 YP_002485370.1 ATPase AAA VFG0079 Protein 0.0 60
Cyan7425_4704 YP_002485370.1 ATPase AAA VFG0080 Protein 1e-153 54