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Name : Cyan7425_4645 (Cyan7425_4645) Accession : YP_002485312.1 Strain : Cyanothece sp. PCC 7425 Genome accession: NC_011884 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 4727269 - 4728543 bp Length : 1275 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : GTGATTGACCTGAAATTATTACGTGACAACCCCCAGGAGTTCAGTGATCGACTGGCAAAGCGAGGCAAGTTTGACCTCCA ACCGATTCTGGATCTGGATCGGCAGCAGCGGGAACTAGAAGTCGAACGATCGCAATTGCAAGCCCGCAGTAACGCGATCG CCAAGCAGATCGGAGAGAAAATGAAGTCGGGCAATAAATCCGATCCAGCCCTAGAAGGACTCAGAGCGGAAGCAGGTCAG ATCAAAACCACACTGGCCGAGTTGGAACCGAAAGAGAAGCAACTGAAAGATGAGCTAGAGCAACAATTGCTCCTGATTCC CAACCTGCCGAGTGACTCTACCCCAGTGGGTAAGGATGAAGCCGAGAACGTAGAAGTGCGCCGCTGGGGCGAGGAGTATA TTCCTAAGTCGAAGGATATTTTGCCCCACTGGGAAATGGGTGAGAAGCTGGGGATTCTTAACTTTGAACGATCGGTAAAA ATTGCCCAGAGCCGGTTTGCGACCTTAATTGGGGCAGGAGCGGCTTTAGAACGGGCTTTAATTCAGTTCATGCTCGATCG CCACACCAGTGCGGGTTATCTGGAAGTTTTACCGCCGTTTTTAATTAACAGCACCTCTCTGACAGCGACGGGGCAGTTAC CCAAATTTGCCGAAGAAAGCTTTAAGTGTGAAGCCGATGACCTCTGGCTGGCCCCCACCGCTGAAGTGCCCGTCACCAAC CTCTATCGGGATGAAATTCTGACCGCGGAAAATTTACCGATTTATCACTGTGCCTATACCCCCTGTTTTCGGCGGGAGGC AGGCAGCTATGGGCGGGATACCCGTGGACTGATCCGTTTACACCAATTCAATAAAGTGGAGCTGGTCAAGCTGGTTCATC CCAGTACATCGGAACAGGAACACGAAGCTTTAGTCCGGGATGCTTCGGCCATTCTGGAAGCGCTGCAACTACCTTACCGG GTGATTGAACTCTGCACGGGAGATTTAGGCTTTTCCGCCGCCAAATGTTATGACCTGGAAGTGTGGTTGCCCTCAGCTGG ATGCTACCGGGAAATTTCCAGTTGCTCTAATTTCTACGATTTTCAGGCCCGCCGGGGTAAGATTCGCTTCAAAGAAAGTG GTCAGAAAGGCACTCAGTTTGTCCATACGCTGAATGGCTCTGGTCTGGCGGTGGGGCGCACCATGGCCGCGATTCTGGAA AATTACCAGCAACCCGATGGTAGTGTCCGCATTCCTCCGGTTTTACAACCTTATTTAGGACGGGAAACGCTTTAG Protein sequence : MIDLKLLRDNPQEFSDRLAKRGKFDLQPILDLDRQQRELEVERSQLQARSNAIAKQIGEKMKSGNKSDPALEGLRAEAGQ IKTTLAELEPKEKQLKDELEQQLLLIPNLPSDSTPVGKDEAENVEVRRWGEEYIPKSKDILPHWEMGEKLGILNFERSVK IAQSRFATLIGAGAALERALIQFMLDRHTSAGYLEVLPPFLINSTSLTATGQLPKFAEESFKCEADDLWLAPTAEVPVTN LYRDEILTAENLPIYHCAYTPCFRREAGSYGRDTRGLIRLHQFNKVELVKLVHPSTSEQEHEALVRDASAILEALQLPYR VIELCTGDLGFSAAKCYDLEVWLPSAGCYREISSCSNFYDFQARRGKIRFKESGQKGTQFVHTLNGSGLAVGRTMAAILE NYQQPDGSVRIPPVLQPYLGRETL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-93 | 48 |
