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Name : Cyan7425_4150 (Cyan7425_4150) Accession : YP_002484825.1 Strain : Cyanothece sp. PCC 7425 Genome accession: NC_011884 Putative virulence/resistance : Unknown Product : integrase protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 4207022 - 4208143 bp Length : 1122 bp Strand : - Note : PFAM: integrase protein; integrase domain protein SAM domain protein; KEGG: ser:SERP2506 transposase A DNA sequence : GTGAGAGTCCAGAGAATCAGACTGCCGAACGGAAAAGTTACATGGACGCTGCTGGATAATGAGGGTCGCTTTGTCGAGCC AGTCAAGTCTTATGTCCGGTATCTGGAGAGCGTAGGGAGATCGCCAAATACCATCCAGGCTTACCTGAACCACCTAAAGC TGTTCTGGGAATTCCTTGGGGGTGCGGATCTCGATTGGAAGCAATTGAAGTTGGAGCATCTGGCCGACTTCATGACCTGG CTCCGCAGGCCAGATCCCAGAGTGATCTCACTTCAACCAGTGGAGGCAAAGAGATCAGAGGCGACAGTTAACCTTGTTTT GTCCGCTGTTTATGGTTTCTACGATTTCCATGAGCGCAACGGGACGATTGAGGGGATAGAGCTTTACAGACACCAGTTCC AACCCGGCCGGAAATACAAATCATTCCTGCATCACGTCAACAAAGGCAAGGAGACACGGATTCGGTTGCTCAAGATTAAG CCACCCCGCAAACTGCCAAAGACCCTGGATGAGGAAGCGGTTAAGCGGGTTATCGAGGCTTGTAAGCGGATCAGGGATAA ATTTCTGATTACCTTGCTCCACGAAACCGGAATGCGAATCGGACAAGCCTTAGGACTCAGGCATGAGGATGTCCACTCCT GGGACAACGAGATCCAGATCGTCCCCAGAGATGACAACATCAACGGCGCAAGGGCGAAAACGAGAGACACGTATAAGCTA CATGTCAGCAAGGAATTGATGGGGCTGTACTCAGCCTACGTCACCACAGAATACCCGGAGGACATCGATTCGGATTACGT GTTTGTCAACATCTGGGAGGGCATGAGAGGCTATCCGCTAAGCTATTCAACTGTGCAGGCTTTGTTTCGTCGCTTGTCCA GGGATGCAGAGGTCAGGGTTACACCTCATATGTTCAGACATACCCACGCAACGGATCTAATTCGCACGGGGATGCAGATG TCATACGTCCAGAAGCGACTCGGACACGCCAGTATTCAGACCACGATTGACACCTACGTCCATGTCACGAATGAAGACAT GAAGCACGAGTACCAGAAATATATAGAGAGCCAAAAAGATGTCAGTACCTCAGAAGATCCAGAAGAGGGCATACCCACGT AG Protein sequence : MRVQRIRLPNGKVTWTLLDNEGRFVEPVKSYVRYLESVGRSPNTIQAYLNHLKLFWEFLGGADLDWKQLKLEHLADFMTW LRRPDPRVISLQPVEAKRSEATVNLVLSAVYGFYDFHERNGTIEGIELYRHQFQPGRKYKSFLHHVNKGKETRIRLLKIK PPRKLPKTLDEEAVKRVIEACKRIRDKFLITLLHETGMRIGQALGLRHEDVHSWDNEIQIVPRDDNINGARAKTRDTYKL HVSKELMGLYSAYVTTEYPEDIDSDYVFVNIWEGMRGYPLSYSTVQALFRRLSRDAEVRVTPHMFRHTHATDLIRTGMQM SYVQKRLGHASIQTTIDTYVHVTNEDMKHEYQKYIESQKDVSTSEDPEEGIPT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | NP_370580.1 | transposase A | Not tested | Type-II SCCmec | Protein | 5e-74 | 46 |
| tnpA | NP_373292.1 | transposase A for Tn554 | Not tested | Type-II SCCmec | Protein | 5e-74 | 46 |
| tnpA-3 | YP_190048.1 | transposase A | Not tested | Type-II SCCmec | Protein | 5e-74 | 46 |
| tnpA | BAB47667.1 | transposase A(Tn554) | Not tested | Type-III SCCmec | Protein | 4e-74 | 46 |
| tnpA | BAC53829.1 | transposase A(Tn554) | Not tested | SRImec-III and SCCmec-III region | Protein | 4e-74 | 46 |
| tnpA | BAC57491.1 | transposaseA | Not tested | Type-IIIinv SCCmec | Protein | 4e-74 | 46 |
| unnamed | BAA82201.1 | transposaseA | Not tested | Type-II SCCmec | Protein | 4e-74 | 46 |
| tnpA1 | YP_039526.1 | transposase A 1 | Not tested | Type-II SCCmec | Protein | 5e-74 | 46 |
