Gene Information

Name : Cyan7425_4150 (Cyan7425_4150)
Accession : YP_002484825.1
Strain : Cyanothece sp. PCC 7425
Genome accession: NC_011884
Putative virulence/resistance : Unknown
Product : integrase protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 4207022 - 4208143 bp
Length : 1122 bp
Strand : -
Note : PFAM: integrase protein; integrase domain protein SAM domain protein; KEGG: ser:SERP2506 transposase A

DNA sequence :
GTGAGAGTCCAGAGAATCAGACTGCCGAACGGAAAAGTTACATGGACGCTGCTGGATAATGAGGGTCGCTTTGTCGAGCC
AGTCAAGTCTTATGTCCGGTATCTGGAGAGCGTAGGGAGATCGCCAAATACCATCCAGGCTTACCTGAACCACCTAAAGC
TGTTCTGGGAATTCCTTGGGGGTGCGGATCTCGATTGGAAGCAATTGAAGTTGGAGCATCTGGCCGACTTCATGACCTGG
CTCCGCAGGCCAGATCCCAGAGTGATCTCACTTCAACCAGTGGAGGCAAAGAGATCAGAGGCGACAGTTAACCTTGTTTT
GTCCGCTGTTTATGGTTTCTACGATTTCCATGAGCGCAACGGGACGATTGAGGGGATAGAGCTTTACAGACACCAGTTCC
AACCCGGCCGGAAATACAAATCATTCCTGCATCACGTCAACAAAGGCAAGGAGACACGGATTCGGTTGCTCAAGATTAAG
CCACCCCGCAAACTGCCAAAGACCCTGGATGAGGAAGCGGTTAAGCGGGTTATCGAGGCTTGTAAGCGGATCAGGGATAA
ATTTCTGATTACCTTGCTCCACGAAACCGGAATGCGAATCGGACAAGCCTTAGGACTCAGGCATGAGGATGTCCACTCCT
GGGACAACGAGATCCAGATCGTCCCCAGAGATGACAACATCAACGGCGCAAGGGCGAAAACGAGAGACACGTATAAGCTA
CATGTCAGCAAGGAATTGATGGGGCTGTACTCAGCCTACGTCACCACAGAATACCCGGAGGACATCGATTCGGATTACGT
GTTTGTCAACATCTGGGAGGGCATGAGAGGCTATCCGCTAAGCTATTCAACTGTGCAGGCTTTGTTTCGTCGCTTGTCCA
GGGATGCAGAGGTCAGGGTTACACCTCATATGTTCAGACATACCCACGCAACGGATCTAATTCGCACGGGGATGCAGATG
TCATACGTCCAGAAGCGACTCGGACACGCCAGTATTCAGACCACGATTGACACCTACGTCCATGTCACGAATGAAGACAT
GAAGCACGAGTACCAGAAATATATAGAGAGCCAAAAAGATGTCAGTACCTCAGAAGATCCAGAAGAGGGCATACCCACGT
AG

Protein sequence :
MRVQRIRLPNGKVTWTLLDNEGRFVEPVKSYVRYLESVGRSPNTIQAYLNHLKLFWEFLGGADLDWKQLKLEHLADFMTW
LRRPDPRVISLQPVEAKRSEATVNLVLSAVYGFYDFHERNGTIEGIELYRHQFQPGRKYKSFLHHVNKGKETRIRLLKIK
PPRKLPKTLDEEAVKRVIEACKRIRDKFLITLLHETGMRIGQALGLRHEDVHSWDNEIQIVPRDDNINGARAKTRDTYKL
HVSKELMGLYSAYVTTEYPEDIDSDYVFVNIWEGMRGYPLSYSTVQALFRRLSRDAEVRVTPHMFRHTHATDLIRTGMQM
SYVQKRLGHASIQTTIDTYVHVTNEDMKHEYQKYIESQKDVSTSEDPEEGIPT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA NP_373292.1 transposase A for Tn554 Not tested Type-II SCCmec Protein 5e-74 46
tnpA-3 YP_190048.1 transposase A Not tested Type-II SCCmec Protein 5e-74 46
tnpA BAB47667.1 transposase A(Tn554) Not tested Type-III SCCmec Protein 4e-74 46
tnpA BAC53829.1 transposase A(Tn554) Not tested SRImec-III and SCCmec-III region Protein 4e-74 46
tnpA BAC57491.1 transposaseA Not tested Type-IIIinv SCCmec Protein 4e-74 46
unnamed BAA82201.1 transposaseA Not tested Type-II SCCmec Protein 4e-74 46
tnpA1 YP_039526.1 transposase A 1 Not tested Type-II SCCmec Protein 5e-74 46
tnpA NP_370580.1 transposase A Not tested Type-II SCCmec Protein 5e-74 46