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Name : Cyan7425_4149 (Cyan7425_4149) Accession : YP_002484824.1 Strain : Cyanothece sp. PCC 7425 Genome accession: NC_011884 Putative virulence/resistance : Unknown Product : integrase protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 4205479 - 4206975 bp Length : 1497 bp Strand : - Note : PFAM: integrase protein; KEGG: ser:SERP2507 transposase B DNA sequence : GTGAATTGCATAAGGGGAGGCAAACACCCAACCTCTGGCAGTCAGCAATATCGTTGCAAAGACTGTAATCGTGTTTTTAC GCCAGTCAAAGCTAAGCTTTTCGATGTCAATCCTGAAGGCGAATACAAGAAAGATGTCTGGGACTGTCGAAGACTGGGCA TCGATCCAGGTAGGGGAAAGCAAGCCTACACCTTGAATTTCACAGGTATTTCTCAGCCTTGGCTACTTGAGCCAGCTAAA GCGTACATCAAATTTACGCTCAGCACTCAAAGCTTCAGTACAGCCTTGAACAAAGTAGGCTCACTCAAGAAATTTTCTAC CTTCTTAAGCGAGAAATATCCATCACTTGAACCAGCACAGCTTGACCGAGCAGTCATTATTGATTATTTGGCTTATTTGG CAGCTAAGCACCCAAAAGCAACCACTAGAGCGCTTTTTCTGTGCGACATACGCGACTTCCTGGATCTTTGCTATCAAAAT GAATGGTTGCCTGTCATAAGGTATTTGATTCGTAAGGAAGATTACCCGAAGCGTTCCAAGGCTTTACCCAGATACATCCC AGAGTGTGTCATGGACCAGCTTATGTCGCATGTTGACGACTTGCCGGAACCTGTAATGCGTATGACCCTTGTTATCAGTG AATGCGGAATGCGGGTCTCTGAATTGCTCTATCTGAAACCTGACTGCTTGCTGCAAGACAAAGCGGGTGATTGGTTCTTG CGGTATTACCAGTTCAAGATGAAAAAGGAAATCACCATTCCTGTTAGTCGAGAGATTGTGCGAATCATTCAGGAACAGCG TCGCTACATCCAGGAACATTTAGGTGACTCCTACGAGTATTTATTTTGCTCAAGCTTGAGCGGACCTTCGGGCTTCCGAC CAAGACCAAAACCAATGATTCGCGAATCCTTTGCCCGATTCCTTAACGACCTAGCCGAGAAGCATAATATTTGCGATGAA AGCGGTAAGTTGTGGCGTTTCCAAACCCACCAATTCCGCCACACGGTTGGAACCCGCATGATTAACAACGGAGTGCCACA GCACATCATCCAACGCTATCTAGGGCATGAGTCGCCTGAAATGACAGCGGTATATGCCCAAATCCACGACCAGACGATGA AGCAGGAGATCGCTAAGTTTCAAGGCAAGGTGGTTAACATTGCTGGCCAGGTGGTTGATTCCGTTACGCCAGAGGTCGAA ACCCTAGAACTGGAATGGTTTAAGCGCAATATTCAAGCTCAAGCTCTACCCAATGGTTCCTGTGCCTTGCCTACCATTTC CCAAGGCTGTCCACACGCTAATGCCTGCCTGACCTGCACTCACTTCAGAACCACCGTTGAGCATTTGCCGGAACACAAGA AACAGTTAGAACAGACAGAGCGAATCCTTGAGAAGGCAAAGGCGAACGGCTGGTTACGCCAGGTTGAGATGAACGAGAAG ATTACAGAGAGTCTGCAGAACATCATCAATACGCTGGAGGGTTCTAGCAATGACTGA Protein sequence : MNCIRGGKHPTSGSQQYRCKDCNRVFTPVKAKLFDVNPEGEYKKDVWDCRRLGIDPGRGKQAYTLNFTGISQPWLLEPAK AYIKFTLSTQSFSTALNKVGSLKKFSTFLSEKYPSLEPAQLDRAVIIDYLAYLAAKHPKATTRALFLCDIRDFLDLCYQN EWLPVIRYLIRKEDYPKRSKALPRYIPECVMDQLMSHVDDLPEPVMRMTLVISECGMRVSELLYLKPDCLLQDKAGDWFL RYYQFKMKKEITIPVSREIVRIIQEQRRYIQEHLGDSYEYLFCSSLSGPSGFRPRPKPMIRESFARFLNDLAEKHNICDE SGKLWRFQTHQFRHTVGTRMINNGVPQHIIQRYLGHESPEMTAVYAQIHDQTMKQEIAKFQGKVVNIAGQVVDSVTPEVE TLELEWFKRNIQAQALPNGSCALPTISQGCPHANACLTCTHFRTTVEHLPEHKKQLEQTERILEKAKANGWLRQVEMNEK ITESLQNIINTLEGSSND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | BAC57490.1 | transposaseB | Not tested | Type-IIIinv SCCmec | Protein | 1e-83 | 46 |
| tnpB | BAC57471.1 | transposase B | Not tested | Type-IIIinv SCCmec | Protein | 1e-86 | 46 |
| tnpB | BAB47666.1 | transposase B(Tn554) | Not tested | Type-III SCCmec | Protein | 8e-87 | 46 |
| tnpB | BAC53828.1 | transposase B(Tn554) | Not tested | SRImec-III and SCCmec-III region | Protein | 8e-87 | 46 |
| tnpB1 | YP_039525.1 | transposase B 1 | Not tested | Type-II SCCmec | Protein | 1e-86 | 46 |
| tnpB | BAA82202.1 | transposaseB | Not tested | Type-II SCCmec | Protein | 8e-87 | 46 |
| tnpB | NP_370579.1 | transposase B | Not tested | Type-II SCCmec | Protein | 1e-86 | 46 |
| tnpB | NP_373291.1 | transposase B for Tn554 | Not tested | Type-II SCCmec | Protein | 1e-86 | 46 |
| tnpB-3 | YP_190049.1 | transposase B | Not tested | Type-II SCCmec | Protein | 1e-86 | 46 |
| unnamed | BAB47606.1 | transposase B of Transposon Tn554 | Not tested | Type-III SCCmec | Protein | 2e-83 | 46 |
