Gene Information

Name : Cyan7425_3262 (Cyan7425_3262)
Accession : YP_002483950.1
Strain : Cyanothece sp. PCC 7425
Genome accession: NC_011884
Putative virulence/resistance : Virulence
Product : periplasmic solute-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 3224688 - 3225713 bp
Length : 1026 bp
Strand : -
Note : PFAM: periplasmic solute binding protein; KEGG: syn:sll1598 ABC-type manganese transport system substrate-binding protein

DNA sequence : 
ATGAATTCCAATTGTGCCTTCACTGCAGGGGCGATCGGGCAGAGAACGGGTTTGCGGCAGGGCTTCCGCAGACAATCTGC
TGTTGTTGGCCTGTTGTTAGGGATCTGGCTGAGTGGATGTAACACCGAGACCGTTTCGACATCATCCCCTCAGACGGGTA
GCCCCACCCTTGTCCCTCAAACCCAGGCAGACAAAAAAGTGGTCTTGACCACCTTTACCGTACTGGCGGATATGGCGCGC
AATGTTGCAGGGGACGGGCTGGTGGTGGAATCGATCACGCGACCTGGGGCAGAAATCCACGGTTATGAGCCAGCCCCCAG
CGATTTGACCAAAGCGCAGGATGCGGATCTAATTCTTTATAACGGGCTGAATCTGGAAGTGTGGTTTAAGCGATTTCTTG
GCAACCTCAGGGATGTGCCCACGGCCTTGCTGACGGAAGGGATTGAACCGATCCCGATCGCAGAAGGTCCCTATACCGAT
AAGCCCAATCCCCACGCCTGGATGTCGCCCCGAAATGCGCTGATCTACGTCGAAAATATTCGTAAAGCCTTGGTCAAACT
CGATCCAGCCAATGCTGAGACCTATAACGCCAATGCAGCCGCCTATAGCAAACAGTTAAAGGCGATCGACCAGCAACTCC
GTACAGATCTAGCCAAAGTTCCGGCAAATCAACGCTATCTGGTCACCTGTGAAGGAGCCTTTTCCTATCTGGCCCGGGAC
TACGGTATGAAAGAAATTTATATGTGGCCGATCAATGCCGAACAGCAATTTACCCCCAGACAGGTGCAGGCGGTGATTGA
AAAAGTCAAAACAAATAATATTCCCACTATCTTCTGTGAAACCACTGTGAGCGATAAGGGGCAAAGGCAAGTGGCCAGCA
CCACCGGAGCCCGGTTTGGTGGCAACCTTTATGTCGATTCCCTTTCCACCCCAGAGGGCCCCGTTCCCACCTATTTAGAG
CTGCTGAAATATGACGTTCGCACCATTACTAACGGCCTGCTAACCGATCGCACTACTCAAAATTGA

Protein sequence : 
MNSNCAFTAGAIGQRTGLRQGFRRQSAVVGLLLGIWLSGCNTETVSTSSPQTGSPTLVPQTQADKKVVLTTFTVLADMAR
NVAGDGLVVESITRPGAEIHGYEPAPSDLTKAQDADLILYNGLNLEVWFKRFLGNLRDVPTALLTEGIEPIPIAEGPYTD
KPNPHAWMSPRNALIYVENIRKALVKLDPANAETYNANAAAYSKQLKAIDQQLRTDLAKVPANQRYLVTCEGAFSYLARD
YGMKEIYMWPINAEQQFTPRQVQAVIEKVKTNNIPTIFCETTVSDKGQRQVASTTGARFGGNLYVDSLSTPEGPVPTYLE
LLKYDVRTITNGLLTDRTTQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 7e-78 60
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 7e-78 60
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 7e-78 60
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-78 60
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 5e-78 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan7425_3262 YP_002483950.1 periplasmic solute-binding protein BAC0439 Protein 6e-77 61
Cyan7425_3262 YP_002483950.1 periplasmic solute-binding protein BAC0349 Protein 3e-78 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan7425_3262 YP_002483950.1 periplasmic solute-binding protein VFG0525 Protein 3e-78 60