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Name : Cyan7425_3142 (Cyan7425_3142) Accession : YP_002483831.1 Strain : Cyanothece sp. PCC 7425 Genome accession: NC_011884 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 3114437 - 3117598 bp Length : 3162 bp Strand : - Note : KEGG: ana:alr4604 type I site-specific deoxyribonuclease chain R; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases DNA sequence : ATGAGCAAGTTCACCACTGAAGACCAGATCGAAGCCTATAACCTCGAACTGCTTGATGCCCTTGGTTATAGCTACAAACA CGGCTCTACGATCGAACCTGAAGGAGCTGCACCCGAACGGCAAAGCTTTGGTGATGTGCTGCTCAAAGACCGGCTGAATG AGGTCATTGGGCGGATCAATTCCCACATTCCCCCTGAGATTCGCCAGCAAGCCCAGCGGGAACTGCAAAACATCGCCAGT CCTGACCTGATCAGCAACAACGAAGCCTTCCACCGCTACCTCACGGAGGGTATCACGGTTGAATACACCAAGAATGGCGA AATCAAAGGTGAGCAACTCTGGCTGATTGACTGGGACAATCCCGACAATAACGAATTTCTCGCCGTCAACCAGTTCACCG TCATTGAAGATAACCACAATCGCCGCCCCGATATCATCCTCTTTATTAACGGGCTGCCCCTGGTAGTGATTGAACTCAAA AATGCCGCTGATGCCAAAGCTAACCTGCAAGCTGCCCATAACCAATTGCAAACCTACAAACGCGAGATTCCCAGCCTCTT TACCTACAACGCCCTGCTGGTGATCTCCGATGGCATCTCTGCCCGTGCCGGTTCCCTCTCTGCGCCCTACAGCCGCTTCA GCCAGTGGAAACGCAAACTCCCCAACGGCGAGATTGATAATAACCCCGACACCAACGAACTGGAAATTCTCACCCAGGGG ATGCTCAATAAAGCCACCCTGCTTGACCTGATCCGACACTTCACCGTTTTTGAAAAGGTCAAGATTGTAGACCCCAACAC CGAAGTCGTCACCCTGCAAACGATTAAGAAGCTAGCCGCCTATCACCAGTATTACGCCGTCAATTTAGCGGTTGAGAGTG TCATCGCTGCCACCCGATCCAACTATCGCGGCGGGGTCGTGTGGCACACCCAGGGCAGCGGTAAGTCCCTCTCAATGGTG TTTCTCAGCGGTAAGCTGGTGCTGGCACTGGATAACCCCACGATTGTTGTCCTCACCGATCGCAACGACCTGGACGATCA ACTCTTCGATACCTTTGCCGGGTGCCGCCAACTGCTCCGCCAAGATCCCCAACAAGCGGATAACCGGGATGCGGTGCGGG AACTGCTCAACGTCGCCTCCGGTGGCATCATCTTTACCACCGTGCAAAAGTTTGCCCCGGTCGAAGGGGAAACCCTGTAT CCCAAGATTAGCGATCGCACCAACATCGTTGTCCTGGCTGATGAAGCTCACCGCAGCCAATACGGATTCAAAGCCAAACA GGTCAACATCAAAGACGAGCAAGGCAATGTAGTTGGAAAACAGACCCGCTATGGTTTTGCCAAATACATCCGCGATGCCC TGCCCAAGGCCACCTTCGTTGGTTTCACCGGCACCCCCGTCGAACAGACCGACAAAAACACCCCCCAGGTTTTTGGCAGC TATATCGACGTTTACGACATTGCCCAGGCAGTCGAAGATGGAGCAACCGTCCCGATTTACTACGAAAGCCGCTTGGTCAA AGTAGACCTGGACGAACATGGGCGGGAATTGCTGGACGAACTCGACGAAGACCTCAGCTTTGAAGACCTGGGTAGTACTC AGCAAGCCAAGGCACGGCAAACCCAACTAGAAGCGATCGTCGGCTCCACCCAACGCCTGGAAACGATCGCCCAGGACATC ATCACCCACTTTGAGAAACGCCAAACCGCCAATCGGGGTAAGGGCATGATCGTTACCCTCAGCCGCCAGATTGCCGCCAA CCTCTACGACAACATCATCAAACTTCGTCCTGGTTGGCATAGCGACGACCTGAACAGCGGGAAGATCAAAGTCGTCATGA CTGCCAGTGCCTCCGATGCAGGTAACCTCGTTGCACACCACACCAGCAAGAAGGATCGTCAAGTCCTGGCGCAACGCCTC AAAGACCCCGACAATGACCTGGAACTCGTCATCGTCTGCGATATGTGGCTCACCGGGTTTGATGCCCCCTGCCTCCACAC AATGTACATCGACAAGCCCATGAAGGGGCATAACCTGATGCAGGCGATCGCCCGGATCAACCGTGTCTACTTCGAGAAGC AGGGTGGCTTGATTGTGGATTACTTAGGTGTGGCCCAAGAACTCAAAAATGCCCTCTCCTTCTACTCCCAGAGCGGCGGT AAAGGCGACCTGACCGTCGATCAAGACGTAGCGATCGGGTTACTGCTGCGAACTCTGGAAGTCGTCGAAGGCATCATGGC GGAATTCAACTATCAGCCCTACTTCACTGCAAGCACTGGGGATAAACTCAATATTCTCAAATCCGCTACCAACTATGTGG CTGATCCACAAATCAAAGACCGATTCCTTGATGCGGTGACGGCCCTCTCGAAAAGCTACGCCCTCATCGCCCATCACCCA GAAGCGATCGCCCAAGCTGAGAAAATTTCCTTCTTCCAGGCGATTCAAGCCAGCCTCCGTAAACTTGAACCCAGTGACGG CAGCCTCAGCAATGCTGACATCGAAACCGCCATTCGTCAGGTGGTCGATCAAGCTCTTGTCTCCGATACCGTCATCAACA TCTTTGACGAAGCAGGCATCAAAAGCCCGGATGTCTCGGTGATCTCCGACGAATTCCTGGCAGATGTCGAGGGGATGGAG CATAAAAACCTGGCGGTGGAACTACTCAAACGCCTGCTCCGGGATGAAGTCAAAGCCCAGCGTCGCACTAACCTCGTCCG CAGCCGCCAACTTGCCGAAATGTTGGAAGAATCCCTCCGACGCTATCAAAATCAGGTGATCAGCGTGACGGAAGTGATCC AGGAGCTGATCAGCCTCTCCAAAGATGTCCAGGCTGCGAAACAACGGGGTGAAGAGTTGGGGCTAGAACCCTACGAACTC GCTTTTTACGATGCCCTGTCCCAAAATCAGAGTGCCAGAGAGGTGATGGGTCAGGACAAATTACGGGAGCTAGCGATCAC CCTGGTGGTCAGAATCCGCAAGAATGCCACCATTGACTGGAATCTCAAAGAAAGTGTCCGCGCCAGAATGAAGGTCATGG TCAAACGCCTACTCCGAGAATATGGCTACCCACCTGACATGCAGGCCCTCGCGATCGAGCTAGTGCTGGAGCAAGCTAAG GTGTTCACGGAATTTGAAGTTGAAACGAATTGCTCCAACTAA Protein sequence : MSKFTTEDQIEAYNLELLDALGYSYKHGSTIEPEGAAPERQSFGDVLLKDRLNEVIGRINSHIPPEIRQQAQRELQNIAS PDLISNNEAFHRYLTEGITVEYTKNGEIKGEQLWLIDWDNPDNNEFLAVNQFTVIEDNHNRRPDIILFINGLPLVVIELK NAADAKANLQAAHNQLQTYKREIPSLFTYNALLVISDGISARAGSLSAPYSRFSQWKRKLPNGEIDNNPDTNELEILTQG MLNKATLLDLIRHFTVFEKVKIVDPNTEVVTLQTIKKLAAYHQYYAVNLAVESVIAATRSNYRGGVVWHTQGSGKSLSMV FLSGKLVLALDNPTIVVLTDRNDLDDQLFDTFAGCRQLLRQDPQQADNRDAVRELLNVASGGIIFTTVQKFAPVEGETLY PKISDRTNIVVLADEAHRSQYGFKAKQVNIKDEQGNVVGKQTRYGFAKYIRDALPKATFVGFTGTPVEQTDKNTPQVFGS YIDVYDIAQAVEDGATVPIYYESRLVKVDLDEHGRELLDELDEDLSFEDLGSTQQAKARQTQLEAIVGSTQRLETIAQDI ITHFEKRQTANRGKGMIVTLSRQIAANLYDNIIKLRPGWHSDDLNSGKIKVVMTASASDAGNLVAHHTSKKDRQVLAQRL KDPDNDLELVIVCDMWLTGFDAPCLHTMYIDKPMKGHNLMQAIARINRVYFEKQGGLIVDYLGVAQELKNALSFYSQSGG KGDLTVDQDVAIGLLLRTLEVVEGIMAEFNYQPYFTASTGDKLNILKSATNYVADPQIKDRFLDAVTALSKSYALIAHHP EAIAQAEKISFFQAIQASLRKLEPSDGSLSNADIETAIRQVVDQALVSDTVINIFDEAGIKSPDVSVISDEFLADVEGME HKNLAVELLKRLLRDEVKAQRRTNLVRSRQLAEMLEESLRRYQNQVISVTEVIQELISLSKDVQAAKQRGEELGLEPYEL AFYDALSQNQSAREVMGQDKLRELAITLVVRIRKNATIDWNLKESVRARMKVMVKRLLREYGYPPDMQALAIELVLEQAK VFTEFEVETNCSN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 48 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 48 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 45 |
