Gene Information

Name : Cyan7425_2969 (Cyan7425_2969)
Accession : YP_002483669.1
Strain : Cyanothece sp. PCC 7425
Genome accession: NC_011884
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2928785 - 2931403 bp
Length : 2619 bp
Strand : +
Note : KEGG: ava:Ava_2335 ATPase; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: ATPase AAA

DNA sequence :
ATGCAACCTACGAATCCAAACCAATTTACGGAAAAAGCCTGGGAGGCGATCGTCCGCACACCGGAAATCGTCAAGCAATC
CCAGCAACAACAGATTGAAAGTGAACATTTGATCAAAGCTTTACTGGAACAGGATGGCCTGGCCAGTAACATTTTTACTA
AAGCCGGTGTAAATGTGCAGCGTCTGCGCGATCGAGCCGATGAGTTTATTGATCGCCAGCCCAAGCTCAGCAATCCCAGC
AGTTCAGTGTTCCTTGGCCGCAGCTTAGATACCCTGCTGGATCGAGCCGATCAGTTCCGCAAGCAGTATAGCGATGAATT
TATTTCGATCGAGCATCTGATCCTCAGCTATCCCCAGGACGATCGGTTGGGCAAAGCACTGCTGCAGGAATTCGGGCTGG
ATGAACGCAAACTAAAAGAAGTGGTAGACCAAATTCGCGGAAGTCAAAAAGTGACAGACCAGAATCCTGAAGGCAAGTAT
GCATCCCTGGAGAAGTACGGTCGGGATCTCACCCAACTGGCGCGGCAGGGCAAACTCGATCCCGTCATTGGTCGGGATGA
TGAAATTCGTCGAACGATCCAAATCCTGTCCCGTCGGACTAAGAATAACCCCGTGTTGATTGGGGAACCAGGGGTCGGTA
AAACTGCCATTGCTGAAGGCTTAGCGCAACGGATTATTGCCCGTGATGTGCCGGAATCCCTCCGCGATCGCCAGTTGATT
GCCCTGGATATGGGTGCCTTGATTGCTGGGGCCAAGTACCGGGGTGAATTTGAAGAACGGTTGAAGGCGGTGTTGAAGGA
AGTCACCGAATCCGGCGGCCAAATTATTCTATTTATTGATGAAATCCATACGGTGGTCGGCGCTGGGGCAACCCAGGGGG
CGATGGATGCCAGTAACCTGCTCAAACCCATGCTGGCGAGAGGTGAACTGCGCTGTATTGGGGCCACCACACTGGATGAA
TATCGTAAATATATTGAAAAAGATGCGGCGCTAGAACGGCGCTTCCAACAGGTTTATATCGATCAGCCCAGCGTTGAGGA
TACAATTTCGATTCTGCGCGGACTGAAGGAACGCTATGAAGTTCACCACGGGGTCAAAATTTCGGACAATGCCCTGGTAG
CGGCGGCTAGTCTGTCTTCTCGCTATATCAGCGATCGGTTCCTGCCCGACAAGGCGATCGACCTGGTGGATGAGGCGGCA
GCTAAGCTGAAGATGGAAATTACCTCCAAACCGGAAGAACTGGATGAGATCGATCGCAAGATCCTGCAACTGGAAATGGA
ACGGCTATCTTTAGAGAAAGAAAGTTCAGCAGCCTCCAGAGAGCGGTTGGAGCGGTTAGAAAAAGAACTGGCGGATCTGA
AGCAAGAACAGACGAGCCTGAATGCCCAGTGGCAGGGAGAAAAGCAGATCATCGATCAACTCCAGGCAATTAAGGAAGAG
ATCGAGCAATTGAATGTGCAGATTCAGCAGGCTGAGCGAGATTTTGACTATAACAAAGCAGCAAAGCTAAAGTTTGGTCA
GCTAACGGATTTGCAACGGCGGTTAGAAGAAACTGAAACCCAACTGGCTCAGGCTCAAACCAGTGGTAAAACAATGCTGC
GGGAAGAAGTGACCGAGGCAGATATTGCTGAAATCATTTCCAAGTGGACAGGCATCCCCATCAGCAAACTGGTGGAGTCC
GAAATGCAAAAGCTGCTCCATCTCGAAGATGAACTGCACCGCCGGGTGATCGGCCAGGAAGAAGCTGTTACTGCTGTGGC
AGATGCCATCCAACGATCGCGGGCCGGACTGGCAGACCCCAATCGGCCGATCGCTAGCTTTATCTTTCTCGGTCCTACAG
GGGTTGGTAAAACCGAACTGGCCAAAGCCCTGGCAGCCTACCTGTTTGATACCGAAGAGGCGATGGTGCGGATTGACATG
TCCGAGTACATGGAGAAGCACTCTGTTTCCCGCCTGGTGGGTGCCCCTCCCGGATACGTGGGTTATGAAGAAGGCGGTCA
ACTCACCGAAGCGATACGTCGTCGTCCCTATGCCGTCATCCTGTTTGATGAGATCGAAAAAGCTCACCCCGATGTTTTTA
ACATCATGCTGCAAATCCTCGATGATGGGCGCGTTACCGATTCCCAGGGACGGACGGTGGACTTCAAAAATACGGTGATC
ATCATGACCAGCAACATTGGGTCCCAGTACATTCTGGATCTGGCGGGGGATGATAGCCGCTATGCCGAAATGCAGGAACG
GGTGATGGAAGCCATGCGAGCCAGTTTCCGCCCCGAATTTCTTAACCGGATTGATGAGATTATCATCTTCCACAGTCTAC
GCAAGGATGAACTGCGTCAGATTGTCAAACTGCAGGTACAACGGCTAGAACAACGCCTCAGCGATCGCAAGATGTCGTTG
AAGCTGAGCGAATCGGCCCTCGATTTCCTGGCTGAGGTCGGTTATGACCCGGTGTTTGGAGCCAGACCGCTAAAACGGGC
CATTCAAAGGGAGTTAGAAACCCCGATCGCCAAGTCGATTCTGCGCGGTGAATTCCACGATGGAGACACGATCTTTGTCG
ATGTAGCGAACGAACGTCTGCAGTTCAAACGCCTCCCCCATGAGGTCTTGACCATCTAA

Protein sequence :
MQPTNPNQFTEKAWEAIVRTPEIVKQSQQQQIESEHLIKALLEQDGLASNIFTKAGVNVQRLRDRADEFIDRQPKLSNPS
SSVFLGRSLDTLLDRADQFRKQYSDEFISIEHLILSYPQDDRLGKALLQEFGLDERKLKEVVDQIRGSQKVTDQNPEGKY
ASLEKYGRDLTQLARQGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIARDVPESLRDRQLI
ALDMGALIAGAKYRGEFEERLKAVLKEVTESGGQIILFIDEIHTVVGAGATQGAMDASNLLKPMLARGELRCIGATTLDE
YRKYIEKDAALERRFQQVYIDQPSVEDTISILRGLKERYEVHHGVKISDNALVAAASLSSRYISDRFLPDKAIDLVDEAA
AKLKMEITSKPEELDEIDRKILQLEMERLSLEKESSAASRERLERLEKELADLKQEQTSLNAQWQGEKQIIDQLQAIKEE
IEQLNVQIQQAERDFDYNKAAKLKFGQLTDLQRRLEETETQLAQAQTSGKTMLREEVTEADIAEIISKWTGIPISKLVES
EMQKLLHLEDELHRRVIGQEEAVTAVADAIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAYLFDTEEAMVRIDM
SEYMEKHSVSRLVGAPPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDSQGRTVDFKNTVI
IMTSNIGSQYILDLAGDDSRYAEMQERVMEAMRASFRPEFLNRIDEIIIFHSLRKDELRQIVKLQVQRLEQRLSDRKMSL
KLSESALDFLAEVGYDPVFGARPLKRAIQRELETPIAKSILRGEFHDGDTIFVDVANERLQFKRLPHEVLTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-105 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan7425_2969 YP_002483669.1 ATP-dependent chaperone ClpB VFG2076 Protein 6e-122 42
Cyan7425_2969 YP_002483669.1 ATP-dependent chaperone ClpB VFG2084 Protein 2e-112 41