Gene Information

Name : Cyan7425_2927 (Cyan7425_2927)
Accession : YP_002483628.1
Strain : Cyanothece sp. PCC 7425
Genome accession: NC_011884
Putative virulence/resistance : Resistance
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2889679 - 2890353 bp
Length : 675 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: npu:Npun_F3064 two component transcriptional regulator

DNA sequence : 
ATGCGTATTTTAGTTGTTGAAGATGATCTGCAGTTGGCAGAAATGCTGGCAGAAGTATTAAGTGATCACAACTACATTGT
CGATCTGGCTGAGGATGGAGAAAAAGCCTGGGATTATGTCAACACCCTCGAGTATGATTTAGTGATCCTAGATGTCACTC
TACCCCGCCTGGATGGAATTGGGTTCTGCCAGCGCTGGCGGGGAAAGGGGGAAGCAACTCCAGTTCTGATGCTAACAGCT
CGCGATACTCTAGCAGATAAAGTGACGGGGTTGGATGCCGGTGCAGATGATTACATGGTGAAGCCGTTTGAGTTACCAGA
ACTCCTGGCCAGGGTCAGGGCCATGTTGCGGCGGAGTGGTGCATCCGTTGCCCTCAATCTGTCCTGGGGACGCCTACACC
TCAACCCCAGTACCTATGAAGTTACGTTTGACAATCGTCCTCTTTCTCTCACCCCCAAAGAATATGCCCTGTTGGAACTA
CTAGTCAGCAATGGGCGCAGAGTTTTGAGTCGAACCGGAATTATTGAGCGAATCTGGTCTCTAGAAGATCCTCCCTCTGA
GGAAACGGTTAAATCCCATATCAAGGGGCTGCGGGCCAAGCTGCGAGAGGCCGGTGCTCCAGATAATTTTATTGAAACTG
TTCATGGTCTGGGCTATCGACTGCAACAAGCTTAA

Protein sequence : 
MRILVVEDDLQLAEMLAEVLSDHNYIVDLAEDGEKAWDYVNTLEYDLVILDVTLPRLDGIGFCQRWRGKGEATPVLMLTA
RDTLADKVTGLDAGADDYMVKPFELPELLARVRAMLRRSGASVALNLSWGRLHLNPSTYEVTFDNRPLSLTPKEYALLEL
LVSNGRRVLSRTGIIERIWSLEDPPSEETVKSHIKGLRAKLREAGAPDNFIETVHGLGYRLQQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-34 43
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan7425_2927 YP_002483628.1 winged helix family two component transcriptional regulator AF310956.2.orf0.gene Protein 5e-35 43
Cyan7425_2927 YP_002483628.1 winged helix family two component transcriptional regulator AE016830.1.gene2255. Protein 9e-34 43
Cyan7425_2927 YP_002483628.1 winged helix family two component transcriptional regulator U35369.1.gene1.p01 Protein 9e-34 43
Cyan7425_2927 YP_002483628.1 winged helix family two component transcriptional regulator BAC0197 Protein 1e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan7425_2927 YP_002483628.1 winged helix family two component transcriptional regulator VFG1390 Protein 4e-43 46
Cyan7425_2927 YP_002483628.1 winged helix family two component transcriptional regulator VFG0473 Protein 7e-29 42