Gene Information

Name : join (Ddes_0438)
Accession : YP_002479028.1
Strain : Desulfovibrio desulfuricans ATCC 27774
Genome accession: NC_011883
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 529887 - 530899 bp
Length : 1013 bp
Strand : -
Note : KEGG: bvi:Bcep1808_0279 phage integrase family protein

DNA sequence :
ATGGCAAGCATTCGAAAGCGAGGCGACCTGCAATGGGAAGCCAGAATCCGGCGGAAAGGCTGGCCTGTTACCTGTAAAAC
CTTCAACACAAAAAGCGATGCGAAAAATGGGCGAGAGACATTGAAAATGAGATGGACAGAGGCGTGTTCACGTCTCGTAC
CGAGGCGGAAAATACCACCCTCAACGAAGCTCTTGAACGGTTTATCGCTGAATACGTCCCGCGCTACAATAATCCCAAGC
TGGAAACCATAAAAGCAAGGGCCTTGCAGCGCCGAAAAATAGCCACAAAATTTATGGCGGCTATCCGGTCGAAAGACATT
GCGGACTTTATGCAGGAACGCGCAGCCGAAGGCGTTGCCGGAAACACCATCCGGCTTGACTTGGCCCTCATATCCCGTGT
TTTTAATGTGGCTATAAGTTCTTGGGGCATGGAATCGCTGAGAAACCCCGTCAGCAGGATTCCAAAGCCCAAAGTGAGCA
GCGGGCGAACCAGAAGACTTGAAGGCGATGAGGAAGAAAGGCTTTTGGCGGCCTGTTCTGATTCTCTGCGGCCTATTGTC
CGTTTTGCCATTGAAACAGCCATGCGGCGCGGCGAAATGGCCTCGTTGACGTGGCAGAATATAGACCTTGAAAAAAGTAC
GGCTTATCTGCCCAAGACCAAAAACAACGAAGAGCGGACAGTTCCCCTCTCTCCTGCCGCTGTGCAAATTTTGAAAAACT
TGGAGAAAGGCGAAAGCGCCCGCGTTTTTCAGCTTTCCGATGTTTCCATAACCCAGGCATTTATCAAGACGTGCCAGAAG
GTAGGGATAGAAGGACTCACCTTCCACGACTTACGGCACGAAGCAACCTCGCGCCTTTTCGAGCGAACCGACTTGGACAT
TATGGAAATCAAGTCCATCACCGGGCATAAGACGTTGCAAATGCTCGCCAGATATAGCCACTTGAGGACGTATAAGCTTG
TTGACAGGCTGGCGGGCGCTAGGCGTGGGGAAACTCCCCCTAACCTCTCGTGA

Protein sequence :
MASIRKRGDLQWEARIRRKGWPVTCKTFNTKSDAEKWARDIENEMDRGVFTSRTEAENTTLNEALERFIAEYVPRYNNPK
LETIKARALQRRKIATKFMAAIRSKDIADFMQERAAEGVAGNTIRLDLALISRVFNVAISSWGMESLRNPVSRIPKPKVS
SGRTRRLEGDEEERLLAACSDSLRPIVRFAIETAMRRGEMASLTWQNIDLEKSTAYLPKTKNNEERTVPLSPAAVQILKN
LEKGESARVFQLSDVSITQAFIKTCQKVGIEGLTFHDLRHEATSRLFERTDLDIMEIKSITGHKTLQMLARYSHLRTYKL
VDRLAGARRGETPPNLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rci NP_458640.1 shufflon-specific DNA recombinase Not tested SPI-7 Protein 4e-43 42
rci NP_807850.1 shufflon-specific DNA recombinase Not tested SPI-7 Protein 4e-43 42
rci AAC38070.2 Rci Not tested SPI-7 Protein 3e-43 42