Gene Information

Name : Ddes_0274 (Ddes_0274)
Accession : YP_002478867.1
Strain : Desulfovibrio desulfuricans ATCC 27774
Genome accession: NC_011883
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 317570 - 318358 bp
Length : 789 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: dvl:Dvul_2602 integrase catalytic subunit

DNA sequence :
GTGCGTAAGGCATGCGCCATAGTGCTCATCAGTCGGACGCTGTATGCCTATGCACCGACACCGCGCGACGACACCGACGT
TATCGAGACGCTTATCCGGTTGGCCGACAGCTATCCCAGATACGGATTTGGCAAGCTGTTCAGCCTGCTGCGGCGACAGG
GATACCGGTGGAACCACAAGCGGGTTCATCGCATCTACCGTCAACTGAAGCTGCATCTACGGCGTAAAGGGAAGAAGCGA
CTGCCAACACGTAACCCACAGCCCTTGGCCGTTCCACCACAGGCCAACTGCTGCTGGTCAGTGGACTTCATGCATGACTC
GCTCTCCAGCGGACAGCGGTTCCGTACGTTCAACGTGGAGGATGATTACAGCCGGGAATGCCTCGCCATTGAGGTAGACA
CCAGCCTCCCCGCAGCCCGGATATTACGGGTTCTGGACAGGGTGGCGGCATGGCGAGGGTATCCGGAAAAGCTGAGAATG
GACAACGGGCCGGAACTGATCTCGATCCAGATGGCTGAGTGGGCTGAGGCGCATGGAGTGGAGCTGGAGTTCATCCAACC
GGGCAAGCCTACCCAAAACTCGTATGTGGAACGATTTAACAGGACGTATCGGACGGAGGTTCTTGACTACTACCTGTTCA
GCAGCCTCGCGGAAGTTAAGGAAATCACAGCGAACTGGCTGAAGCAGTACAACGAAGAACGGCCCCATGAGTCCTTGGGC
AACATTCCTCCGGCTGAGTATTTGGAAATCAATTCACCCCAGAAAGTCTCTACCTTCGGGTGGCACTAA

Protein sequence :
MRKACAIVLISRTLYAYAPTPRDDTDVIETLIRLADSYPRYGFGKLFSLLRRQGYRWNHKRVHRIYRQLKLHLRRKGKKR
LPTRNPQPLAVPPQANCCWSVDFMHDSLSSGQRFRTFNVEDDYSRECLAIEVDTSLPAARILRVLDRVAAWRGYPEKLRM
DNGPELISIQMAEWAEAHGVELEFIQPGKPTQNSYVERFNRTYRTEVLDYYLFSSLAEVKEITANWLKQYNEERPHESLG
NIPPAEYLEINSPQKVSTFGWH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 1e-73 62
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 8e-33 41