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Name : Ddes_2307 (Ddes_2307) Accession : YP_002480880.1 Strain : Desulfovibrio desulfuricans ATCC 27774 Genome accession: NC_011883 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2773854 - 2775128 bp Length : 1275 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATTGATCTTAAACTGGTGCAGAGGCAGCCCGAAGTTTTAGCCAAGGCCCTGGCCGACCGGCATTCGGGTATCAGCGT AGACGCATTTCTTGAGCTGGACGGCCGCCGCCGCTCCCTGCTTACGGAAGTGGAAGGGCTTAAAAGCAAGCGTAACGAGG CTTCAGCCCAGGTGGCCGCGCTCAAGCGCTCCGGCCAGGACGCTGCCCCCCTGCTCACCGAACTGTCTTCCCTGTCAGAC CGCATCAAGGAACTGGACGTGGAAACGACGCAGGTCAAGACTGACGTGGAAAACCTGCTCATGAGCATGCCCAACATTCC CGACAGCACCGTGCCTGTGGGCGCCGACGAAAACGAAAACGTCGAGGTAGGCCGCTGGGGCGAACCGCGGCAGCTTGACT TTGAACCTCGCCCGCATGACGACATCGGCACGGCCCTTGGCGGACTGGACTTCGAGCGTGCCGCGCGTCTTACAGGCAGC CGCTTTGTCGTGTCCCTGGGCTGGGCCGCGCGCCTTGAACGCGCCCTGGTGAACTTTTTTCTCGACAGGCACACCCGGCA CAATGATTACCTTGAGGTAAGCCCTCCCTATATGGTCAACCGCGCCTCAATGACAGGCACGGCCCAGCTGCCAAAATTTG AAGAAGACCTCTTCAAGCTGGCCGAGTGGGACTATTTTCTCATCCCCACTGCGGAAGTGCCGCTGACGAACCTGCATGCG GGCGAAGTGCTTGAAGAGTCCGACCTGCCGCGCGCCTACTGTGCGGCCACGCCCTGCTTCCGTTCCGAAGCGGGCAGCGC GGGCAAAGACACGCGGGGCATCATTCGCCTGCACCAGTTCACCAAGGTGGAGATGGTACGCTTTGCCCACCCCGAAGACA GTTTCAACCAGCTTGAGCTTATGCGCGGCCACGCCTGTAACCTGCTGGAACTGCTTGAACTGCCCCACCGTGTCATCACC CTTTGCACCGGCGATATGGGCTTTGCCGCTGCCAAGACCTATGATGTGGAAGTATGGCTGCCCGCCCAGAAAACCTACCG TGAGATCTCTTCCTGCTCCAACTGCACGGACTTTCAGGCCCGCCGCGCGGACATCCGCTTCAGGCCCAAGGGCGGCAAAA CGGCTTTTGTCCACACGCTCAACGGCTCCGGCCTGCCCACCGGGCGTACCATTGCCGCCATTCTGGAAAACGGCCAGCAG AAAGACGGCAGCGTGGTGCTGCCCAAGGTGCTGGTTCCCTATATGGACGGGGTGGAAAGCATCGAGCCGCGCTAA Protein sequence : MIDLKLVQRQPEVLAKALADRHSGISVDAFLELDGRRRSLLTEVEGLKSKRNEASAQVAALKRSGQDAAPLLTELSSLSD RIKELDVETTQVKTDVENLLMSMPNIPDSTVPVGADENENVEVGRWGEPRQLDFEPRPHDDIGTALGGLDFERAARLTGS RFVVSLGWAARLERALVNFFLDRHTRHNDYLEVSPPYMVNRASMTGTAQLPKFEEDLFKLAEWDYFLIPTAEVPLTNLHA GEVLEESDLPRAYCAATPCFRSEAGSAGKDTRGIIRLHQFTKVEMVRFAHPEDSFNQLELMRGHACNLLELLELPHRVIT LCTGDMGFAAAKTYDVEVWLPAQKTYREISSCSNCTDFQARRADIRFRPKGGKTAFVHTLNGSGLPTGRTIAAILENGQQ KDGSVVLPKVLVPYMDGVESIEPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-110 | 55 |
