Gene Information

Name : Ddes_2106 (Ddes_2106)
Accession : YP_002480680.1
Strain : Desulfovibrio desulfuricans ATCC 27774
Genome accession: NC_011883
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2537558 - 2538304 bp
Length : 747 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvu:DVU3324 ABC transporter, ATP-binding protein

DNA sequence :
ATGCTTGAAGCAATTGACATAGTCAAATCATATAGCGCAGGCGGCGTGTCTGCCCCGGTGCTGCGCGGCGTGAACCTGCA
CATTGAGCAGGGAGAATTTGTAGCAGTCACAGGCCGTTCAGGTTCGGGTAAATCCACCCTGCTCAACGTGCTTTCCACCC
TGACAGAGCCTGACAGCGGACAGGTGCTTTTTGAGGGGGCCGATTTGCGCGCCATGCGCGAAAAACAGCGTGACCATTTG
CGTAACAGTGCCTTTGCCATGATTTTTCAGGCGCATCACCTTATGCCCTATCTTACGGTGATGGAAAATGTGCTGCTGCC
CGGGGCCAACACCTTTCGCGGCATACCGGAAGAACTGCGTCGCAGGGCATCTGCCTGCCTGGAGCGGGTGGGGCTGGAAC
ACAAAAAAGACAGCCTGCCCTCATCCCTTTCCGGTGGCGAACAGCAGCGTGTAGCCATTGCCCGCGGCCTTGCCGCCGCA
CCGCGTGTGCTTTTTGCCGACGAGCCTACCGGCAGCCTGGACATGGCTACCGGCGATGCCATCATGCAACTTTTGCAGGA
GCTGAACAGCGAAGGCCTGACCATCGTCATGGTCACCCATAACCCGGACTATGCCGCGCTGGCCGGCCGCAGTGTGCACA
TGCTGGAAGGCAGTATGGGGCAGGCCCCCACACCGGCATTGGCAGTTGACAGACGCGCCCCTGTAGGTAATGGAAGAACT
AGTCTTTCACCAAGGGAGTTTTCATGA

Protein sequence :
MLEAIDIVKSYSAGGVSAPVLRGVNLHIEQGEFVAVTGRSGSGKSTLLNVLSTLTEPDSGQVLFEGADLRAMREKQRDHL
RNSAFAMIFQAHHLMPYLTVMENVLLPGANTFRGIPEELRRRASACLERVGLEHKKDSLPSSLSGGEQQRVAIARGLAAA
PRVLFADEPTGSLDMATGDAIMQLLQELNSEGLTIVMVTHNPDYAALAGRSVHMLEGSMGQAPTPALAVDRRAPVGNGRT
SLSPREFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ddes_2106 YP_002480680.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-41 44
Ddes_2106 YP_002480680.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-29 43