Gene Information

Name : Ddes_1678 (Ddes_1678)
Accession : YP_002480255.1
Strain : Desulfovibrio desulfuricans ATCC 27774
Genome accession: NC_011883
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 2017809 - 2019887 bp
Length : 2079 bp
Strand : +
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: cbt:CLH_0916 K+-transporting ATPase, B subunit

DNA sequence :
ATGTCAGCAAAAACAAGCAATCCCGCCAACACGAACTGCATTCTCTGGCAGGCGCTGGCTGCATCGCTGGTCAAGCTGTC
GCCCCGTGACCAGGTACGAAATTTCGTCATGTTCACCGTCTACCTTTCCGCCATTCTGGCAACGGGGCTGACCGTGCTGG
GGGCCGCAAACATACTTTCGCCCGCCACGGCGCAGACGGGATTTGCAGGCGCCATTGCGATCATCCTGTGGTTTACTGTA
TTTTTTGCCAATTTTGCCGAGTCCATCGCCGAGGGCCGCGGCAAAGCCCAGGCCGAAAGCCTGCGCAAGGCACGCAGAAA
CGTTACCGCACGCAAACTTGCCGACCCGGCCATGCACGATGAGCACGAAATCGTACCCTCCACAACCCTCAAGCCCGGCG
ACAGCATCCTGGTGTATGCCGGTGAACAGATCCCCGCCGACGGCGATGTAACGGAAGGCGCGGCATCGGTGGATGAAAGC
GCCATCACGGGCGAATCCGCCCCGGTTATCCGTGAAAGCGGCGGTGACCGCTGCGCGGTTACCGGTGGCACTACAGTTCT
TTCCGACTGGCTGGTCATACGGGTCACCAGCGAGGTGGGCCGCAGCTTTCTGGACAGGATGATCGCCATGGTTGAAGGAG
CCGCCCGCCAGAAAACTCCCAGCGAAGTCGCGCTGAATGTTCTACTGGTGGCACTTACCGTCATTTTTCTTCTGGTCACG
GTATCGCTGTGGTGCTTTGCCCGCTTTACGGCCGGCCAGGAGCACGTTGCAAATCCGGTGGGTTTTGCCGCGCTGGTGGC
GCTTTTTGTCTGCCTTGCGCCAACCACCATAGGTGCGCTGCTTTCCGCCATTGGTATTGCAGGCATGAGCCGCCTCAACC
GAGCCAATGTGCTGGCCATGAGTGGGCGGGCCATTGAGGCCGCCGGAGATGTGGATGTTCTGCTGCTGGATAAAACAGGA
ACCATCACGCTGGGCAATCGTCAGGCCGTGGAATTCATTCCCGTAGACGGCCATAGCGGCGAGGAGCTTGCTGATGCGGC
CCAGTTGGCCTCACTGGCCGATGAAACCCCCGAAGGACGCAGCATTGTACAGCTTGCCCGTGATCAATTCACCCGCTGCG
ACATGAGTTTGCATGGCAAAGACGCTGTTTTTATTCCTTTTTCTGCGCAAACTCGCATGAGCGGCGTGGATGTGGCAGGA
AAGCACATCCGCAAGGGCGCTGCCGATGCCGTGCGGGCTTTTGTTGAAAAGAATGGCGGCAGTGAAAGCCTGCGCTGTGA
GGAGGCGGTCAACGCCATAGCACGCCAGGGCGGTACTCCCCTGGTGGTGGCGCGCGAAAGCAGCATCCTCGGGGTCATAC
ATCTCAAGGACATTATCAAAGACGGTGTCAAGGAGCGTTTTGCAGAACTGCGCCGCATGGGCATCAGGACTGTCATGGTC
ACCGGCGACAATCCGCTCACTGCGGCGGCCATCGCGGCAGAAGCCGGAGTTGACGATTTTCTTGCCGGGGCCACCCCCGA
AACAAAGCTGTCTCTCATACGCGAATTCCAGGCACGGGGTCATCTGGTTGCCATGACAGGCGATGGGACCAACGACGCTC
CCGCCCTGGCGCAGGCCGATGTGGCCGTGGCCATGAATACGGGGACACAGGCCGCCAAAGAGGCAGGCAATATGGTGGAT
CTGGACTCATCGCCCACCAAACTGCTGGATATCGTGCGCATCGGCAAGCAGCTGCTCATGACGCGCGGCAGCCTGACCAC
GTTTTCTCTGGCGAACGATGCGGCCAAATACTTCGCCATCATTCCGGCACTGTTCGTGAGTCTGTATCCGGGACTGGCCG
CTCTCAACATCATGAACCTGCACAGCCCGCAAAGTGCCGTTCTTTCAGCCACCATATACAATGCACTTATCATAGTGGCG
CTTATCCCCCTGGCCCTGCGCGGCGTGAAATACCGCGAAGAAAGTTCGGGGCAACTCCTGCGGCGCAACCTGCTTGTTTA
TGGTCTGGGGGGACTGGCCGCGCCTTTTGCGGCCATCAAGCTTATCGACATGTGTCTGACCGGCCTAGACCTGGTCTGA

Protein sequence :
MSAKTSNPANTNCILWQALAASLVKLSPRDQVRNFVMFTVYLSAILATGLTVLGAANILSPATAQTGFAGAIAIILWFTV
FFANFAESIAEGRGKAQAESLRKARRNVTARKLADPAMHDEHEIVPSTTLKPGDSILVYAGEQIPADGDVTEGAASVDES
AITGESAPVIRESGGDRCAVTGGTTVLSDWLVIRVTSEVGRSFLDRMIAMVEGAARQKTPSEVALNVLLVALTVIFLLVT
VSLWCFARFTAGQEHVANPVGFAALVALFVCLAPTTIGALLSAIGIAGMSRLNRANVLAMSGRAIEAAGDVDVLLLDKTG
TITLGNRQAVEFIPVDGHSGEELADAAQLASLADETPEGRSIVQLARDQFTRCDMSLHGKDAVFIPFSAQTRMSGVDVAG
KHIRKGAADAVRAFVEKNGGSESLRCEEAVNAIARQGGTPLVVARESSILGVIHLKDIIKDGVKERFAELRRMGIRTVMV
TGDNPLTAAAIAAEAGVDDFLAGATPETKLSLIREFQARGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVD
LDSSPTKLLDIVRIGKQLLMTRGSLTTFSLANDAAKYFAIIPALFVSLYPGLAALNIMNLHSPQSAVLSATIYNALIIVA
LIPLALRGVKYREESSGQLLRRNLLVYGLGGLAAPFAAIKLIDMCLTGLDLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-167 64
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 7e-168 64
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 4e-132 56
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 8e-132 55
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-131 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-131 55
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-131 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-131 55