Gene Information

Name : Ddes_1577 (Ddes_1577)
Accession : YP_002480155.1
Strain : Desulfovibrio desulfuricans ATCC 27774
Genome accession: NC_011883
Putative virulence/resistance : Virulence
Product : ParB domain-containing protein nuclease
Function : -
COG functional category : K : Transcription
COG ID : COG1475
EC number : -
Position : 1897521 - 1898138 bp
Length : 618 bp
Strand : -
Note : SMART: ParB domain protein nuclease; KEGG: ppr:PBPRA1349 hypothetical protein

DNA sequence :
ATGGAACTTGAGCAATGGATAAATTCTCTGGAAGACGCGCTGCTGTCTGATACCCGCCGTTTTGACCAGCGGGTGAAAGT
ATATAACCGTCTTGTGGATATGGCCGCCCGGTATCTGGATACGCCTCATCCGGCCGCGCGCCCTCAGTTGGTGCGCGTGG
ACAAGGTTAAAGGCAACGATTACAACCCCAACAAGGTCGCGCCGCCTGAAATGCGTTTGCTGCGCCTGTCCATGGCTAAA
GACGGCCAGACCATGCCTGTGGTTGTGGCCCGGGGCAGCAGGGGCGCCTTTCAGATTGTGGACGGCTTTCATCGCCGCAG
CGTCGCAAAAAATGCGCCCGAAGTTCGCGAGGCCCTTTCGGGATATCTTTTCATCGTTGAGCTGGACAAGCCTTTTGAAG
ACAGGATTACGTCCACGGTCCGGCATAACATGGCCAGAGGCGCGCACAAGGTCGAGCTGACGGCAAAGCTGGTGACTGCC
CTGAAAGGCTATAACTGGAGCAGCGAGCGTATTGGCCGGGAGCTGGGTATGGACCCTGACGAAGTCCTGCGGCTGAAGCA
GATGACTGGTCTGGCCGAAGCTTTTGCAGACAGGGAATTTTCCAGGGCCTGGGAATAG

Protein sequence :
MELEQWINSLEDALLSDTRRFDQRVKVYNRLVDMAARYLDTPHPAARPQLVRVDKVKGNDYNPNKVAPPEMRLLRLSMAK
DGQTMPVVVARGSRGAFQIVDGFHRRSVAKNAPEVREALSGYLFIVELDKPFEDRITSTVRHNMARGAHKVELTAKLVTA
LKGYNWSSERIGRELGMDPDEVLRLKQMTGLAEAFADREFSRAWE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 7e-32 47
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 9e-32 47
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 6e-29 47
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 2e-28 47
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 2e-28 47
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 2e-28 47
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 2e-28 47
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 2e-27 45
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 2e-27 45
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 1e-27 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ddes_1577 YP_002480155.1 ParB domain-containing protein nuclease VFG1505 Protein 7e-28 45