|
Name : leuS (HAPS_0952) Accession : YP_002475527.1 Strain : Haemophilus parasuis SH0165 Genome accession: NC_011852 Putative virulence/resistance : Unknown Product : leucyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0495 EC number : - Position : 932243 - 934831 bp Length : 2589 bp Strand : - Note : leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl DNA sequence : ATGATGCAACAACAATACAATCCGAGTGCGATTGAGCCTAAAGTACAGCAGTACTGGGCTGAAAATAAAGTATTCAAAGC AATTAAAGACGAAAGCAAACCAAAATATTACTGTTTATCTATGTTCCCATACCCGTCAGGTCGTCTGCATATGGGACACG TTCGTAACTATACGATCGGCGATGTGGTTTCCCGTTATCAACGTATGAACGGCAAAAATGTGTTACAACCAATGGGTTGG GACGCATTCGGCTTGCCTGCAGAAGGGGCAGCGGTAAAAAATAAAACTGCACCAGCAAAATGGACTTATGAAAATATTGA ATATATGAAAAATCAGCTCAAGGCCTTAGGTTTTGGCTTTGACTGGGATCGTGAAGTGACCACTTGCCGTCCTGAATATT ATAAATGGGAGCAATGGTTCTTCACTGAATTGTACAAAAAAGGCTTAGTATATAAGAAAACATCGACAGTAAACTGGTGT CCGAATGATGAAACGGTGTTAGCAAATGAGCAAGTCCACGAAGGCTGTTGCTGGCGTTGTGATACCCCTGTGGAACAAAA AGAAATTCCGCAATGGTTTATTAAAATTACTGACTATGCGGAGCAATTGTTAAATGACTTAGATCGTCTTCCGTTATGGC CAGATCAAGTGAAAACAATGCAACGCAACTGGATCGGTCGTTCTGAAGGGGTTGAAATTACTTTTAAAGTGAAAGGCACT GATCAAACCTTGCCTGTTTATACTACTCGTCCAGATACTTTCTTTGGTGTGAGCTATGTGGCAGTGGCGGCGGCTCACCC ATTAGCAACCCTGGCAGCAGAAAACAATCCTGCATTAGCTGCCTTTATTCAAGAAGCGAAAAACACCAAAGTGGCGGAAG CGGATATTGCCACAATGGAGAAAAAAGGAATGGCAACAGGGTTGTTTGCTATTCACCCCTTAACAGGCGAAGAAGTTCCT GTCTGGGTCGCTAACTTTGTGTTGATGCACTACGGCACTGGGGCTGTAATGGCAGTACCTGCTCACGATGAGCGTGATTT TGAATTTGCACAAAAATACAATTTACCAATTAAACAGGTGATCGTACCGCTTGATGGTTCTGAATGGGATTTCAGCAAAG CGGCAATGACTGAACACGGTAAATTGATTAACTCTGCGGAATTTGATGGGTTAGATTTTGATGGCGCTTTCAAAGGCATT GCGGATAAATTAGAAGGAATGGGGATCGGTAAACGTCAAGTTAATTACCGCTTGCGTGACTGGGGCGTTTCTCGCCAACG TTACTGGGGGGCGCCAATTCCAATGCTTACCCTTGAAAATGGCGAAACTGTGACTGTACCAATGCAAGATTTACCTGTGG TGTTACCTGAAGATGTGGTGATGGACGGCGTGAAAAGCCCGATCAAAGCAGATCCAGAATGGGCGAAAACCACTTATAAC GGTCAGCCAGCGTTAAGAGAGACAGATACTTTCGATACCTTTATGGAGTCTTCTTGGTATTATGCACGTTATGCGTCGCC ACAATATCAACAAGGTATGTTAGACAAAGAAGAAGCAAACTACTGGCTACCTGTGGATCAATATATCGGCGGTATCGAAC ACGCAACAATGCACTTGCTCTACTTCCGCTTCTTCCACAAATTATTGCGTGATGCCGGTTTCGTGACTAGCGATGAACCG ACAGAAAAATTACTCTGTCAAGGTATGGTGTTAGCGGACGCTTATTACTACACCAGCCCAACCAATGAACGTATTTGGGT GTCGCCAACAGAAGTGACAGTTGAACGTGATGAAAAAGGGCGTATTTTGAAAGCCTTTGACAAAGAAGGGCGTGCGTTGG TACACAGCGGTATGACCAAAATGTCGAAATCGAAAAACAACGGTATTGATCCACAAGAAATGGTGGAAAAATATGGTGCG GATACGGTGCGTCTATTTATGATGTTTGCTTCCCCTGCGGAAATGACATTAGAATGGCAAGAGTCTGGCGTAGAAGGGGC GAAACGTTTCTTAGGTCGTCTTTGGAACTTGGCTTATGAGTATGCACAATCGCCAGCCACTGTTGCATTAGATCCTACGG CATTAAGCAAAGAGCAAAAAGATTTACGCCGTGACGTACATAAAACCATTGCGAAAGTGAGTGATGACATCGGTCGCCGT CAAACCTTTAATACCGCAATTGCAGCAATTATGGAATTGATGAATAAGCTCACCAAAGCACCGCTTGTTAATGATCAAGA CAAAGCCGTGATGGCTGAAGCATTAAATGCGGTGATCCGTATGCTCTACCCAATCACCCCGCATATCTGCTTTGAACTAT GGCAAGCCTTAGGCAATGAGGGTTCAATTGACTTTGCACCTTGGGTGGTGGCAGATGAAAAAGCAATGGTAGAAGATGAA AAACTCGTTGTAGTGCAAGTAAATGGTAAAGTGCGTGGCAAAATTACTGTATCTGCAACCGCAACGGAAGATGAAGTCAA GGCGATTGCGAAAGCCGATGAAAATGTGGCGAAATATCTTGAAGGCGTAGAAATCGTGAAAGAGATCTATGTACCGTTTA AGATGTTGAGTTTTGCGGTGAAAGCATAA Protein sequence : MMQQQYNPSAIEPKVQQYWAENKVFKAIKDESKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPMGW DAFGLPAEGAAVKNKTAPAKWTYENIEYMKNQLKALGFGFDWDREVTTCRPEYYKWEQWFFTELYKKGLVYKKTSTVNWC PNDETVLANEQVHEGCCWRCDTPVEQKEIPQWFIKITDYAEQLLNDLDRLPLWPDQVKTMQRNWIGRSEGVEITFKVKGT DQTLPVYTTRPDTFFGVSYVAVAAAHPLATLAAENNPALAAFIQEAKNTKVAEADIATMEKKGMATGLFAIHPLTGEEVP VWVANFVLMHYGTGAVMAVPAHDERDFEFAQKYNLPIKQVIVPLDGSEWDFSKAAMTEHGKLINSAEFDGLDFDGAFKGI ADKLEGMGIGKRQVNYRLRDWGVSRQRYWGAPIPMLTLENGETVTVPMQDLPVVLPEDVVMDGVKSPIKADPEWAKTTYN GQPALRETDTFDTFMESSWYYARYASPQYQQGMLDKEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGFVTSDEP TEKLLCQGMVLADAYYYTSPTNERIWVSPTEVTVERDEKGRILKAFDKEGRALVHSGMTKMSKSKNNGIDPQEMVEKYGA DTVRLFMMFASPAEMTLEWQESGVEGAKRFLGRLWNLAYEYAQSPATVALDPTALSKEQKDLRRDVHKTIAKVSDDIGRR QTFNTAIAAIMELMNKLTKAPLVNDQDKAVMAEALNAVIRMLYPITPHICFELWQALGNEGSIDFAPWVVADEKAMVEDE KLVVVQVNGKVRGKITVSATATEDEVKAIAKADENVAKYLEGVEIVKEIYVPFKMLSFAVKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| leuS | YP_281511.2 | leucyl-tRNA synthetase | Not tested | Not named | Protein | 3e-158 | 43 |
