|
Name : potB (HAPS_0799) Accession : YP_002475383.1 Strain : Haemophilus parasuis SH0165 Genome accession: NC_011852 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter membrane protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 803774 - 804634 bp Length : 861 bp Strand : + Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component DNA sequence : ATGAAGACTGCTAGTAAGAAATTTCAAAATATTACTGTAGCGGTTATCTTCGGTTGGTTAATTTTCTTTGTATTAATCCC GAACTTACTGGTGTTATTCACCAGTTTTATGACCAAAGACAGTAGTAATCTGATTGAATTTACGTTTTCCCTTGAAAGCT ATGGTCGTTTGATTGATCCACTTTACTCACAAGTATTGTGGAACTCGCTCTGTATGGCTGGGATTGCAACCATTATTTGT TTGGTGGTGGGCTATCCGTTTGCCTTTATGATTGCAAAATTGCCTGCGAAATATCGTCCATTTTTGCTCTTTTTGGTGGT GTTGCCATTCTGGACGAACTCGCTTATCCGTATTTACGGAATGAAGATTTTCCTTGGCGTTAAAGGCGTTCTAAACGAAA CCTTGCTATCTTTGGGTATTATTAGCGAGCCAATCCGTATATTAAATACCGAAATTGCGGTGATTATCGGTTTGGTTTAC ATATTATTGCCTTTTATGATTTTGCCACTCTATTCTTCGATTGAAAAAATTGATGGACGTTTATTAGAAGCAGCAAAAGA TTTGGGTGCAAATGCGTTCCAACGCTTTGTTAAAGTAATTATTCCATTAACAATGCCGGGAATTGTGGCGGGTTGCTTAT TAGTTTTGCTTCCTGCAATGGGTATGTTCTATGTGGCAGACTTATTAGGCGGTGCGAAAGTGTTGCTTGTAGGTAATATC ATTAAAAGTGAGTTCCTTGTCACGCGTAACTGGCCATTTGGCTCTGCAATCAGTATTGCATTAACTGTCTTGATGGCATT AATGATTTATGTGTACTACCGTGCAAATAAACTGATGAATAAGAAAATGGAGTTAGAATAA Protein sequence : MKTASKKFQNITVAVIFGWLIFFVLIPNLLVLFTSFMTKDSSNLIEFTFSLESYGRLIDPLYSQVLWNSLCMAGIATIIC LVVGYPFAFMIAKLPAKYRPFLLFLVVLPFWTNSLIRIYGMKIFLGVKGVLNETLLSLGIISEPIRILNTEIAVIIGLVY ILLPFMILPLYSSIEKIDGRLLEAAKDLGANAFQRFVKVIIPLTMPGIVAGCLLVLLPAMGMFYVADLLGGAKVLLVGNI IKSEFLVTRNWPFGSAISIALTVLMALMIYVYYRANKLMNKKMELE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 3e-79 | 64 |
