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Name : serS (HAPS_0659) Accession : YP_002475255.1 Strain : Haemophilus parasuis SH0165 Genome accession: NC_011852 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 671041 - 672345 bp Length : 1305 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATCGACCAAAACCTTCTGCGTACGAACCTTGAGGAAGTCGCACAAATTTTAAAACTCAAACGTAACTTCAACCTTGA TGTTGCTCGTGTTACCAGCCTTGAAGAACAACGCAAAGCATTACAAGTTAAGGCAGAAAATTTACAGGCGGAGCGTAATG CTCGTTCAAAAAATATCGGTGCGGCGAAAGCACGTGGCGAAGATATTTCTGCGTTACTGACAGAAGTAGATACGATGGGT AGCGAATTAGATGCAGCAAAAGTGGAATTAGATAAAGTCCAAGCGGAAATTCGTGAGTTGTTATTAAACATTCCTAACTT ACCAGCCGATGAAGTGCCTGTGGGTAAAGACGACAGCGAAAATCTCGAAGTATCTCGCTGGGGTACGCCACGTCAATTTG ACTTTGAAATCAAAGATCACGTTACCCTTGGTGAAGGTTTAGGCGGTTTGGATTTCCCTGCTGGTGTGAAATTAACTGGA AGCCGTTTCGTTGTAATGAAAAGCGGTATCGCACGTTTACACCGTGCTTTATCTCAATTTATGTTGGATTTACACACAGA ACAACACGGCTATGTGGAAACCTATGTGCCTTATCTTGTAAACCACGATACTCTTTACGGCACAGGGCAATTACCAAAAT TCGGCGAAGATCTGTTCCATACTCAACCGTTAGATGGACAAGATCCAAATGCGGTACAAAAACCTTACGCTTTAATCCCA ACCGCAGAAGTGCCAGTTACTAATCTTGTGCGTGATGAGATCTTAGACGAAGAAAGTTTACCACTGAAACTGACCGCTCA CACCCCGTGCTTCCGTTCAGAAGCAGGTTCTTACGGTCGTGATACCCGTGGCTTAATTCGTATGCACCAGTTCGACAAAG TGGAAATGGTACAAATCGTTGCCCCTGAAAAATCAATGGAAGCCCTTGAAGAATTAACAGGACACGCAGAAAAAGTGTTG CAGTTGCTCAATCTTCCATACCGCAAAATGTTACTCTGTTCTGGCGATATGAGCTTTGGTTCAAGCAAAACCTACGATTT AGAAGTGTGGCTACCGGCACAAAATACCTACCGTGAAATTTCATCTTGCTCAAATATGTGGGATTTCCAAGCTCGCCGTA TGCAAGCACGTTGCAAAGCGAAAGGGGATAAGAAAACTCGTTTAGTTCATACCCTAAATGGCTCAGGTTTAGCTGTTGGA CGTACGCTTGTTGCCGTACTTGAAAACTACCAAAATGCAGATGGTTCTATTACCGTGCCTGAAGTGTTGAAACCGTATAT GGGTGGTGTAGAGGTTATTAAATAA Protein sequence : MIDQNLLRTNLEEVAQILKLKRNFNLDVARVTSLEEQRKALQVKAENLQAERNARSKNIGAAKARGEDISALLTEVDTMG SELDAAKVELDKVQAEIRELLLNIPNLPADEVPVGKDDSENLEVSRWGTPRQFDFEIKDHVTLGEGLGGLDFPAGVKLTG SRFVVMKSGIARLHRALSQFMLDLHTEQHGYVETYVPYLVNHDTLYGTGQLPKFGEDLFHTQPLDGQDPNAVQKPYALIP TAEVPVTNLVRDEILDEESLPLKLTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVAPEKSMEALEELTGHAEKVL QLLNLPYRKMLLCSGDMSFGSSKTYDLEVWLPAQNTYREISSCSNMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVG RTLVAVLENYQNADGSITVPEVLKPYMGGVEVIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-106 | 54 |
