Gene Information

Name : ssb (HAPS_0580)
Accession : YP_002475181.1
Strain : Haemophilus parasuis SH0165
Genome accession: NC_011852
Putative virulence/resistance : Unknown
Product : single-stranded DNA binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 604695 - 605174 bp
Length : 480 bp
Strand : +
Note : COG:L;COG0629

DNA sequence : 
ATGGCAGGCGTGAATAAGGTAATTATAGTCGGCAATCTCGGCAATAACCCTGATATGCGTACAATGCCAAACGGTGACCT
CGTCGTTAAAATTAGTGTCGCTACATCGGAAGAATGGACCGACAAACAAACGGGCGAGAAAAAGCAAAATACCGAATGGC
ACAGCATTATCGCTTTTAGGAAATTAGCCGAAATTATGGGGCAATACCTAAAGAAAGGCTCTAAGGTTTACATTGAAGGT
AAGCTCCGCACACGCAAATGGCAAGCTCAAGACGGTACAGACCGCTACACTACGGAAATTATCGCTGACAAGCTCGAAAT
GCTCAGTAGTTCGCAAGGTGGTAACAGTAACAACAACTGGGCACAAGAACCACAGGGTAAGCCAAAACAGCAACAACAAA
CAAAACAGAAAGAATGGGACGGTTATGCGGATGATGAACGTCTGCCAGCCAATAACTTTGATGATGATATTCCGTTTTGA

Protein sequence : 
MAGVNKVIIVGNLGNNPDMRTMPNGDLVVKISVATSEEWTDKQTGEKKQNTEWHSIIAFRKLAEIMGQYLKKGSKVYIEG
KLRTRKWQAQDGTDRYTTEIIADKLEMLSSSQGGNSNNNWAQEPQGKPKQQQQTKQKEWDGYADDERLPANNFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 7e-37 56
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 6e-31 48
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 6e-31 48
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 4e-31 48