|
Name : HAPS_0489 (HAPS_0489) Accession : YP_002475102.1 Strain : Haemophilus parasuis SH0165 Genome accession: NC_011852 Putative virulence/resistance : Unknown Product : transcriptional accessory protein (S1 RNA binding domain) Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 525459 - 527768 bp Length : 2310 bp Strand : - Note : COG:K;COG2183 DNA sequence : ATGACAGAACTCAACCATCAAATCAGCCAAATTATTGCCGCAGAGTTAGCGGTGCGATCTGAACAAATTTTTGCAGCGAT GACTTTACTTGATGAAGGAAATACCATTCCGTTTATCGCTCGTTATCGTAAAGAAGTCACAGGCGGATTGGACGATACTC AACTTCGTCATTTTGAAACTCGTTTACTCTATTTGCGTGAGCTAAACGACCGCCGTCAAACTATTTTGAAATCCATTGAA GAGCAAGGCAAGCTCACCGATGAACTGCGTGAGAAAATTGAACAAACGCAGAGTAAAACGGAGCTTGAAGATCTCTATTT GCCGTATAAACCAAAACGCCGTACTCGTGGGCAAATTGCGATTGAAGCAGGGCTTGAGCCGTTGGCGGATAGTCTTTGGA ACGATCCTAGCCAAGTGCCTGAAACAGTCGCTGAAGCCTATGTGGACGCAGAAAAAGGTGTGGCAGATGTGAAATCTGCA CTTGATGGGGCAAGATATATTTTGATGGAACGTTTTTCCGAAGATGCAGATCTGCTTGCAAAATTACGTCAATATCTGAC CGCTAATGCCACCCTAGAAGCAAAGGTGATTGAAGGTAAGGAAGAAGAAGGCGAGAAATTCCGTGACTATTTTGCTCACA GTGAGCCGTTGAAAAATGTGCCGTCACATCGTGCCTTAGCGATGTTCCGTGGGCGTAATGAGGGTATTTTGTCGCTCAAT TTGAATGCCGATCCTGATGCGGAAGAAGGTAGCCGTTCAAGTTATTGTGAAGAGATTATTCGTGAGCATTTAGGCGTACA ACTTCGTCAGCAACCGGCAGACAGCTGGCGTTCGCAGGTGATTGCGTGGACATGGAAAATCAAAGCCTTGTTGCACCTTG AAACGGAATTAATGGGGGCATTGCGAGAAAAAGCGGAAGAAGAAGCAATTGATGTATTTGCGCGTAATTTATCCGCATTA TTAATGGCTGCACCGGCAGGGGCAAGAAATACAATGGGATTAGATCCAGGTTTGCGTACTGGGGTGAAAGTGGCTGTGGT CGATAATACGGGTAAATTATTGGATACCGCCACGATTTATCCTCATACGGGACAGATGGACGTTGCAATGGTGACCATTT ATAAGCTGATTAAACAGCATAATGTGGATTTAATTGCGATTGGTAACGGCACGGCTTCCCGTGAAACGGAACGCTTTGCC AAAGAAGTGATTAAAGAGATCAAAGAGAATAAACCGCAAACTGTGGTGGTGAGTGAAGCTGGAGCATCTGTTTATTCGGC TTCAGAATTGGCCGCAACAGAGTTCCCTGAGCTTGATGTATCCTTGCGTGGTGCGGTGTCGATTGCTCGCCGTTTGCAAG ATCCGTTGGCGGAATTGGTGAAAATTGAACCTAAAGCGATTGGCGTAGGGCAGTATCAGCACGATGTTAATCAGTCGCAA CTGGCACGTAAACTGGATGCGGTGGTCGAAGATTGCGTAAATGCGGTGGGCGTGGACTTAAATACCGCTTCTGCACCATT GCTTGCGCGTGTGGCAGGTATGACGAAAACCTTAGCTCAAAATATTGTGGCTTACCGTGATGAAAATGGGCGTTTTAATT CTCGTTCTGACCTGAAAAAAGTCGCTCGCTTAGGACCAAAAGCCTTTGAGCAGTGTGCTGGTTTTATGCGAATTTTAGGC GGAAAAAATCCGCTTGATGCCTCAAGTGTTCACCCAGAAGCCTATCCTGTGGTGGAAAAAATCTTGCAAGCAACCGCTTC TACGTTAGGTGAGTTGATGGGTGATTCAACGAAAATTCATAGTTTGAATGCCAAAGATTTTGTCGATGAACAGTTTGGTT TGCCAACGGTAAACGATATTTTCAAAGAGCTTGAAAAGCCAGGGCGTGACCCTCGTGGTGAGTTCAAAACGGCAATTTTT ATGGACGGCGTAGAAGAAATCAGCGATTTGAAAGTCGGTATGATTTTAGAAGGCACTGTCACTAACGTAACGAACTTCGG GGCGTTTGTGGATATTGGCGTTCATCAAGACGGTTTAGTGCATATTTCAATGTTGTCGAACAGCTTTGTTGAAGATCCGC ACCAAGTGGTGAAAACAGGTGATGTGGTTAAAGTGAAGGTGTTAGAAGTGGATGTGGCTCGTAAACGTATTGCCTTAACG ATGCGTTTGGACGATAAGCCAACGGATAAACGTGATACAAGCGGTGAGAAACGCAAAGAGTTTGGCAAATCCGACCGCTC GCAAAAGTCTGAACGTCAAAGTTTTGGCAACAATGCTTTTGCAGATGCGTTGAAGGGGTGGAAGAAGTAA Protein sequence : MTELNHQISQIIAAELAVRSEQIFAAMTLLDEGNTIPFIARYRKEVTGGLDDTQLRHFETRLLYLRELNDRRQTILKSIE EQGKLTDELREKIEQTQSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADSLWNDPSQVPETVAEAYVDAEKGVADVKSA LDGARYILMERFSEDADLLAKLRQYLTANATLEAKVIEGKEEEGEKFRDYFAHSEPLKNVPSHRALAMFRGRNEGILSLN LNADPDAEEGSRSSYCEEIIREHLGVQLRQQPADSWRSQVIAWTWKIKALLHLETELMGALREKAEEEAIDVFARNLSAL LMAAPAGARNTMGLDPGLRTGVKVAVVDNTGKLLDTATIYPHTGQMDVAMVTIYKLIKQHNVDLIAIGNGTASRETERFA KEVIKEIKENKPQTVVVSEAGASVYSASELAATEFPELDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQSQ LARKLDAVVEDCVNAVGVDLNTASAPLLARVAGMTKTLAQNIVAYRDENGRFNSRSDLKKVARLGPKAFEQCAGFMRILG GKNPLDASSVHPEAYPVVEKILQATASTLGELMGDSTKIHSLNAKDFVDEQFGLPTVNDIFKELEKPGRDPRGEFKTAIF MDGVEEISDLKVGMILEGTVTNVTNFGAFVDIGVHQDGLVHISMLSNSFVEDPHQVVKTGDVVKVKVLEVDVARKRIALT MRLDDKPTDKRDTSGEKRKEFGKSDRSQKSERQSFGNNAFADALKGWKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 62 |
