|
Name : rdgC (HAPS_0196) Accession : YP_002474840.1 Strain : Haemophilus parasuis SH0165 Genome accession: NC_011852 Putative virulence/resistance : Unknown Product : recombination associated protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2974 EC number : - Position : 212416 - 213333 bp Length : 918 bp Strand : + Note : Required for efficient pilin antigenic variation DNA sequence : ATGACATATTGGTTCAAAAATGTAATGATTTACCGTTTAACTAGTGAATTACGCTTCACCAGTAGTGAATTAGACGCACA ATTACAGCAAACAAAATTCACCCCTTGCCAACAAAGCGATATTCAAAAATTTGGCTGGTCGTCACCGCTTGCAGGAAGTG AACTGTTGCACTTTGCACAGGGTCAGCAGTTCCTACTGGTTTCCCATAAAGAAGAAAAATTATTGCCAGCTCACGTTGTC AAAAAAGAAACGGAAAATCGCATTGAAGCCTTAGAACAAAAAGAGCAACGTAAGCTGAAAAAAACGGAAAAGCAGGCGAT CAAAGATGATGTTGTGGCAATGTTGTTGCCTCGTGCGTTTAGTAAACACCAATTTACGGCGATTTGGCTAGACTTAGATA AACAGCTCGTTTATGTAGATAGTGGCTCGGCAAAACGTGCCGAAGATACCCTTGCTTTGTTACGCAAATCCCTTGGTTCT TTGCCTGTTGTGCCGATTTCCTTCACGCTACAACCGAGCGAAGTGATGACAAATTGGGTGGCAAAAGGGCATACACCAAG CTGGCTGACACTTCTAGAAGAAGCGGAATTAAAATCTTTTGATACCGACAGCGTAATCCGTTGTAAACGCCAAGATTTAG AAAGCGACGAAATCAGCCAACATTTACAAGCGGGTAAATTTGTCACAAAACTTGCGTTAGATTGGGAAAATCATTTTTCT TTTGTGTTGAACGAAGATGCCACTCTTGCCCGTGTCAAATTTGCCGATGAAGTGCGTGAAAAGAACGATGATATTTTGAA AGAAGACAAAGCCCAACGTTTCGATGCGGATTTTCTGTTAATGACGGAAGAATTACGTCTGTTTACAGAAAAATTGACGG AAGAGTTTGGGGGGGTAAATTCCTTGTTATCTTTTTAG Protein sequence : MTYWFKNVMIYRLTSELRFTSSELDAQLQQTKFTPCQQSDIQKFGWSSPLAGSELLHFAQGQQFLLVSHKEEKLLPAHVV KKETENRIEALEQKEQRKLKKTEKQAIKDDVVAMLLPRAFSKHQFTAIWLDLDKQLVYVDSGSAKRAEDTLALLRKSLGS LPVVPISFTLQPSEVMTNWVAKGHTPSWLTLLEEAELKSFDTDSVIRCKRQDLESDEISQHLQAGKFVTKLALDWENHFS FVLNEDATLARVKFADEVREKNDDILKEDKAQRFDADFLLMTEELRLFTEKLTEEFGGVNSLLSF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ESA_00998 | YP_001437103.1 | hypothetical protein | Not tested | Not named | Protein | 5e-63 | 47 |
