Gene Information

Name : sgbU (HAPS_1781)
Accession : YP_002476240.1
Strain : Haemophilus parasuis SH0165
Genome accession: NC_011852
Putative virulence/resistance : Unknown
Product : putative L-xylulose 5-phosphate 3-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3623
EC number : -
Position : 1755789 - 1756649 bp
Length : 861 bp
Strand : +
Note : L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate

DNA sequence :
GTGAGAAAACATAAACTAGGTATCTATGAAAAAGCCTTGCCAAAAAACATCAGCTGGCAAGACAGACTGTCTATCGCCAA
AACCTGTGGTTTTGACTTTGTGGAAATTTCCATTGATGAAACTGATGAACGCCTTGCTCGCCTTGATTGGGGTAAAAAAG
AGCGTTTAAAACTTGTGAAAGCGATAGTGAACACAGGTGTAACCATTCCATCAATGTGCCTATCAGGGCATCGCCGTTTC
CCATTTGGTAGTCGTGATGAAGCGACTCGCCAAAAAGCCTACGAAATTATGGAAAAGGCAATTCAATTAGCGGTGGATCT
CGGTATTCGCACCATTCAACTTGCGGGCTATGATGTCTATTACGAAGAACAAGACGAAGGTACAATCCAACGTTTCCAAG
AAGGCTTAGAATGGGCGGTTGAGTTAGCGGCAAGTAACCAAGTGACCATTGCGGTTGAAATTATGGATACTAAATTTATG
AGTTCGATTTCCCGTTGGAAAAAATGGGACGAGATCATCAAATCACCGTGGTTTACCGTTTACCCAGATTTAGGCAATCT
TTCTGCGTGGAACGACAATGTTGCTGAAGAGCTTAAATTAGGTATCGACAAAATCTCGGCTATTCACTTAAAAGATACCT
ACAAAGTTACTGAAACCTGTAAAGGTCAATTCCGTGATGTACCGTTTGGTGATGGTTGCGTGGATTTTGTCAGTTGCTTC
AAAACCCTTGCAGAATTGAACTATCGTGGGGCATTTTTAATTGAAATGTGGACAGAAAAAGCGGAAGAGCCGATTGCTGA
GATCATCAATGCTCGCCGTTGGATTGAACAAAAAATGAAAGAAGGGGGCTTCGAATGTTAA

Protein sequence :
MRKHKLGIYEKALPKNISWQDRLSIAKTCGFDFVEISIDETDERLARLDWGKKERLKLVKAIVNTGVTIPSMCLSGHRRF
PFGSRDEATRQKAYEIMEKAIQLAVDLGIRTIQLAGYDVYYEEQDEGTIQRFQEGLEWAVELAASNQVTIAVEIMDTKFM
SSISRWKKWDEIIKSPWFTVYPDLGNLSAWNDNVAEELKLGIDKISAIHLKDTYKVTETCKGQFRDVPFGDGCVDFVSCF
KTLAELNYRGAFLIEMWTEKAEEPIAEIINARRWIEQKMKEGGFEC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 2e-62 55