Gene Information

Name : xerC (HAPS_1566)
Accession : YP_002476068.1
Strain : Haemophilus parasuis SH0165
Genome accession: NC_011852
Putative virulence/resistance : Unknown
Product : putative site-specific tyrosine recombinase XerC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4973
EC number : -
Position : 1545548 - 1546333 bp
Length : 786 bp
Strand : +
Note : COG:L;COG4973

DNA sequence :
ATGTTACAGCAAGCAGAAGTTACTCGTTGGCAAGAGCTTGATGCATCGACGGTACGTTGGATTTTGTCACAAAGCCATAA
ACAAGGGTTAAGTGCAAAAAGTATTGGTTTACGGTTGGTGGCACTACGTCAGTTTTTGGCGTTTTTGGTGAAGCAAGGGG
AATTAAAGGTAAACCCAACCTTAGGCATAAAATCACCTAAAGCCAATAAGCATCTTCCTAAAAATATTGATGCGGAACAG
ATCGGGCAGTTGCTAAATATAGACAGTAACGAACCGCTTGATCTACGAGATGTGGCAATGATGGAATTGATGTACAGTTC
TGGGCTACGTTTGTCTGAATTACAAGGGTTAGATTTAGGCGATATGGATTTACCTAACCGTGAAGTGAGATTGCTCGGTA
AAGGAAACAAAGAACGTATTGTGCCGATTGGTTCTAAAGCATTAGATGCAATTGAACAGTGGCTTGCAGTACGTGGGCAG
TTTCACCCAAAAGACAACGCCGTTTTTCTTAATCAGCGTGGTGGGCGACTTTCCCACCGCTCTATTCAGTTGGCGATGAA
AAAATGGGGGCAAAAGCAAGCATTGGATACCCACCTTCACCCCCATAAATTACGCCACTCTTTCGCAACGCATATGTTAG
AAGCAAGTCAAGATTTACGAGCGGTGCAAGAACTACTTGGGCACAGTAGTCTTTCGACAACACAAATTTATACGCATCTT
GATTTCCAGTATTTGGCGAGAATTTACGATTTGGCTCATCCAAGAGCTAAAAGGAACAAGTATTAA

Protein sequence :
MLQQAEVTRWQELDASTVRWILSQSHKQGLSAKSIGLRLVALRQFLAFLVKQGELKVNPTLGIKSPKANKHLPKNIDAEQ
IGQLLNIDSNEPLDLRDVAMMELMYSSGLRLSELQGLDLGDMDLPNREVRLLGKGNKERIVPIGSKALDAIEQWLAVRGQ
FHPKDNAVFLNQRGGRLSHRSIQLAMKKWGQKQALDTHLHPHKLRHSFATHMLEASQDLRAVQELLGHSSLSTTQIYTHL
DFQYLARIYDLAHPRAKRNKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-35 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-35 44