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Name : mutS (HAPS_1471) Accession : YP_002475982.1 Strain : Haemophilus parasuis SH0165 Genome accession: NC_011852 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1444736 - 1447297 bp Length : 2562 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGATGGCTCAATATCTCCAACTCAAAGCACAAAATCCCGATATTCTTCTGTTCTATCGTATGGGCGATTTTTATGAGTT ATTTTACGACGATGCCAAAAAAGCGGCTGCGTTGTTAGATATTTCTCTGACTAAACGTGGGCAATCAGCAGGTGAACCAA TTCCAATGGCTGGGGTACCGTATCACGCTGTTGAAGGTTATTTGGCGAAGTTGGTGGCGTTGGGTGAGAGTGTGGCGATT TGTGAGCAAATCGGCGATCCTGCAACCAGTAAAGGTCCTGTTGAGCGTAAAGTCGTACGAATTATCACACCTGGAACGGT CAGCGACGAAGCGTTGCTACCAGAACGCCAAGACAATTTGGTCGCCGCAATTTATCAAGAAAAAGGCGTTTTCGCCCTTG CGACATTAGATATGGCTTCTGGGCGTTTTTTGATTAGCGAATTACCTAACAAAGAGGCACTGTCTGCTGAGTTACAACGC ACCGAACCTGCCGAGATTTTGTATCCTGAAGATTTTTCTGATGTAGGTATTTTACAGGGTTACAAAGGCTTACGCCGCCG ACCTGTTTGGGAATTTGAGCTAGTTACAGCCATTCAGTTGCTTAATCGCCAATTTGGGACACAAAATCTTACAGGTTTTG GAGTAGAAAAGGCGGTGGTTGCCTTGTGTGCGGCTGGTTGTGTCTTGCATTATGCTCAAGAAACTCAACGCACCGCACTG CCACATATCAACAGCATTCATTTGGCTCAAAATAGCGATACTGTCTTACTTGATTCGGCAACTCGCAGAAATTTGGAATT AACCACCAATCTGGCAGGCGGTACAGAAAACACACTTACATCGGTTTTGGATAAATGCGTCACCTCAATGGGGAGTCGTT TACTCAAACGTTGGATCCATCAACCTATTCGTGATTTAGCCAAACTGCATACTCGCCAGCAAACTATTTTGGCATTGCAA AAAAATGAACGTATCGAACCGCTTCAGCCCCTGCTACAACAAGTAGGCGATATGGAACGGATTTTGGCTCGCGTTGCATT ACGCACTGCTCGCCCTCGTGACCTAACCCGTTTACGCACAGCTTTAGAGCATATCCCCGATATTGTAAAACATTCACAAC ATCAGACCGCTTGTTTAGACAATACTTTGCAGCAGATCGCCGATTTTAGCGAGCTATTCGAGCTATTAAACCAAGCAATC ATTGATAACCCACCGCAACTTATCCGTGACGGTGGCGTTATCGCCGAAGGCTACAATGCTGAGTTGGACGAATGGCGAAG TTTGGCAGAAGGGGCAACCAAATTCCTTGAAGATTTAGAAGCGAGAGAACGAGCCAAAACAGGCATTGATACCCTTAAAA TCGGATTCAATGCGGTACACGGCTACTATATCCAAATCAGTCAAGGACAGGCTCACAAAGCTCCGATCCACTATGTCCGC CGTCAAACCTTAAAGAATGCGGAACGTTACATTATCCCTGAGCTGAAAACCTATGAAGATAAGGTGTTGAAAGCCAAAGG GGCTTCTCTTGCCCTTGAAAAACAGCTTTATGATGAACTGTTTGAACTGTTAATGCCACGTTTGGGTGAATTGCAGTTGG CAAGCTTTGTGTTAGCAGAACTTGATGTGCTGACCAACCTTGCCGAACGTGCCGAAAGTTTGAATTATGTAATGCCAAGT TTCAGCCATCAGAGAGGCGTGAATATCAAAGGCGGTCGCCACCCTGTTGTTGAACAAGTACTGAAAACACCGTTTATCGC CAACCCTGTACTGCTCAACCCACAACGCCATTTGCTGATCGTCACAGGTCCGAATATGGGCGGTAAAAGTACCTATATGC GACAAATTGCCTTGATTACTTTAATGGCATATATCGGCAGTTTTGTGCCTGCGGACAGTGCAGAAATCGGACCGATTGAC CGTATTTTTACCCGTATCGGTGCTTCTGATGATTTAGCATCAGGACGCTCAACCTTTATGGTGGAAATGACCGAAATGGC GAACATTCTGCACCAGTCTAGCGAAAACAGCCTTGTTCTTGTTGATGAAATCGGGCGAGGCACCTCGACCTACGATGGCT TATCACTCGCTTGGGCGTGTGCCGAATGGTTAGCGAAGAAAACCCAATCGCTCACCCTATTTGCCACCCACTACTTTGAG CTAACCAGCTTACCAAACCAGCTCAAAGGCGTTGCCAATATCCATTTAGATGCGTTGGAACATAACGACACTATCGCCTT TATGCACAGCGTACAAGAAGGGGCAGCAAGTAAAAGTTATGGTTTAGCCGTTGCCGCCCTAGCAGGCGTACCAAAGCAGG TGATCCAACTTGCGAAACAGAAACTCACACAGCTTGAACGACTTTCGCAACAAACGGCACAATTAGACGCAAATCAACAG CAAGATTTACTCTTTTCGGCGAATTTGCAAAATGCTGAACCAATCTCACCGCTTATCGAACCGTCCAAAGTCGAACAAGC TCTCGCAGAGATTGATCCCGATGAACTCACACCGAAACAGGCGTTGGAGATGTTGTATCGGTTGAAGTTACTTATAAAAT AA Protein sequence : MMAQYLQLKAQNPDILLFYRMGDFYELFYDDAKKAAALLDISLTKRGQSAGEPIPMAGVPYHAVEGYLAKLVALGESVAI CEQIGDPATSKGPVERKVVRIITPGTVSDEALLPERQDNLVAAIYQEKGVFALATLDMASGRFLISELPNKEALSAELQR TEPAEILYPEDFSDVGILQGYKGLRRRPVWEFELVTAIQLLNRQFGTQNLTGFGVEKAVVALCAAGCVLHYAQETQRTAL PHINSIHLAQNSDTVLLDSATRRNLELTTNLAGGTENTLTSVLDKCVTSMGSRLLKRWIHQPIRDLAKLHTRQQTILALQ KNERIEPLQPLLQQVGDMERILARVALRTARPRDLTRLRTALEHIPDIVKHSQHQTACLDNTLQQIADFSELFELLNQAI IDNPPQLIRDGGVIAEGYNAELDEWRSLAEGATKFLEDLEARERAKTGIDTLKIGFNAVHGYYIQISQGQAHKAPIHYVR RQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDELFELLMPRLGELQLASFVLAELDVLTNLAERAESLNYVMPS FSHQRGVNIKGGRHPVVEQVLKTPFIANPVLLNPQRHLLIVTGPNMGGKSTYMRQIALITLMAYIGSFVPADSAEIGPID RIFTRIGASDDLASGRSTFMVEMTEMANILHQSSENSLVLVDEIGRGTSTYDGLSLAWACAEWLAKKTQSLTLFATHYFE LTSLPNQLKGVANIHLDALEHNDTIAFMHSVQEGAASKSYGLAVAALAGVPKQVIQLAKQKLTQLERLSQQTAQLDANQQ QDLLFSANLQNAEPISPLIEPSKVEQALAEIDPDELTPKQALEMLYRLKLLIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | YP_002475982.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 68 |
