Gene Information

Name : lspA (HAPS_1305)
Accession : YP_002475845.1
Strain : Haemophilus parasuis SH0165
Genome accession: NC_011852
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : -
Position : 1282199 - 1282687 bp
Length : 489 bp
Strand : +
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence :
ATGAAAAAAACAGGTTTATCGTGGTTGTGGTTAAGTGTCGTGGTATTAATCACAGATTTATTGAGCAAATACATTGTGGT
ACAACGCTTTGAGCTTTATGAAAGCGTGAATGTTCTGCCGATCTTTAATCTTACTTATGTGAGAAACTATGGGGCGGCGT
TTAGCTTTTTAGCGGATCATTCAGGCTGGCAAAAATATTTCTTTTTAGGTTTAGCTATTGTCATTTCTATTGCATTGATT
GTAATGCTGTTTAAAAATAAAGCGGAGCTCAAACTGCAAAATTCAGCTTATGCTTTGATTATTGGTGGGGCAATCGGCAA
TGCGATTGATCGTGCTTATAATGGCTATGTGGTTGATTTTTTAGATTTTTATTGGGACATTTATCACTATCCTGTATTTA
ACATTGCCGATATTGGTATTGTGGTGGGGGCAGGATTGCTGATTTTAGAATCCATTTTAGAACATCGTAAAAGTAAAAAG
AGTAATTAA

Protein sequence :
MKKTGLSWLWLSVVVLITDLLSKYIVVQRFELYESVNVLPIFNLTYVRNYGAAFSFLADHSGWQKYFFLGLAIVISIALI
VMLFKNKAELKLQNSAYALIIGGAIGNAIDRAYNGYVVDFLDFYWDIYHYPVFNIADIGIVVGAGLLILESILEHRKSKK
SN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 3e-17 53
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 3e-17 52
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 4e-17 52
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 3e-18 48
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 3e-18 48
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 2e-18 48
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 2e-18 48
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 2e-18 48
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 5e-10 45