|
Name : rph (HAPS_1298) Accession : YP_002475838.1 Strain : Haemophilus parasuis SH0165 Genome accession: NC_011852 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : - Position : 1277146 - 1277880 bp Length : 735 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCGTCCAAATAATCGTCCTGTTGATCAAACTCGTCCTGTAAAAATCACTCGTAACTATACTCGCTATGCCGAAGGGTC TGTGTTGGTGGAATTTGGTGAAACCAAAGTGCTGTGTAATGCCACTGTCGAAGAAACTGTACCACGTTTTCTCAAAGGGC AACAACAAGGTTGGGTGACAGCCGAATACGGTATGTTGCCAAGAGCAACCCATAGCCGAACCCAACGTGAAGCGGCGAAA GGCAAACAAGGCGGTCGTACAATGGAAATTCAGCGTTTAATCGCTCGCTCTTTGCGTGCAGTCGTTGATTTGAAAGCCTT AGGTGAGCGTACAATTACGGTAGATTGTGATGTGATACAAGCCGACGGCGGTACACGCACAGCGTCTATCACAGGGGCTT GCGTTGCGTTACACGATGCGATTAACAAATTGATCGCCGATGGCTTATTGAAAGAAAATCCGATGAAAGGATTAGTGGCG GCAATTTCTGTAGGGATTGTCGATGGGCAAGCGGTCTGTGATTTGGAATATGTGGAAGACTCTAACGCAGAAACCGATAT GAATGTAGTGATGGTTGAAGACGGTCGTTTAGTGGAAGTACAAGGCACTGCCGAAGGTGAACCGTTCAGCCATATGGAAT TATTGCAACTCCTTGATTTAGCACAGAAAGGGATTGAGCAGTTGTTTGAAGCACAGCGTCAGGCACTAAATGCAACTTCT GATGCTATACGATAG Protein sequence : MRPNNRPVDQTRPVKITRNYTRYAEGSVLVEFGETKVLCNATVEETVPRFLKGQQQGWVTAEYGMLPRATHSRTQREAAK GKQGGRTMEIQRLIARSLRAVVDLKALGERTITVDCDVIQADGGTRTASITGACVALHDAINKLIADGLLKENPMKGLVA AISVGIVDGQAVCDLEYVEDSNAETDMNVVMVEDGRLVEVQGTAEGEPFSHMELLQLLDLAQKGIEQLFEAQRQALNATS DAIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 2e-62 | 56 |
