Gene Information

Name : alaT (HAPS_1258)
Accession : YP_002475799.1
Strain : Haemophilus parasuis SH0165
Genome accession: NC_011852
Putative virulence/resistance : Unknown
Product : aminotransferase AlaT
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 1235008 - 1236225 bp
Length : 1218 bp
Strand : -
Note : broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor

DNA sequence :
ATGGAACGCTTTGCAAAAACCGATAAATTAGCTCACGTCCGCTACGATATTCGTGGGCCTATACATAAGGAAGCGACCCG
TCTGGAAGAAGAAGGACATAAGATTTTAAAATTAAACATTGGTAACCCGGCCCCATTCGGTTTTGAAGCCCCTGCGGAAA
TTTTAGTTGATGTTATTCGTAACTTACCAACCGCTCAAGGCTATTGCGACTCTAAGGGTTTGTACTCTGCTCGTAAGGCG
ATTGTGCAATATTATCAATTAAAAGGTATGCGTGATTTAGATGTCGGTGATGTTTACATTGGTAACGGCGTATCTGAACT
CATCACAATGTCAATGCAAGCCTTGTTAAATGATGGCGATGAGATTTTAATTCCGATGCCAGATTATCCACTTTGGACAG
CGGCGACAACTCTTGCGGGCGGTAAAGCGGTTCATTACCTTTGCGATGAAGAAAATGAGTGGTTCCCAGATATTGAAGAT
ATTAAATCGAAAATCACTCCAAGAACCAAAGCAATTTTGGTGATTAACCCGAATAACCCAACGGGAGCAGTGTATAGCCG
TCAGTTATTATTGGATATTGTGGCGATTGCCCGTGGACATAACTTGATTATTTTCTCAGACGAAATTTACGAGAAAATTG
TCTATGACGGTGCGGTACATCATCATCTTGCCCCTCTTGCCCCTGATCTTTTAACGGTGACTTATAATGGTTTGTCAAAG
GCATACCGTGTCGCAGGTTTCCGTCAAGGTTGGATGGTGTTAAACGGCCCGAAAAATCAGGCAAAAGGCTTTATTGAAGG
CTTAGATATGCTTGCGTCAATGCGTTTATGTGCCAACACCCCGATGCAACACGCTATTCAAACAGCGTTAGGCGGTTATC
AAAGCATTAACGAATTTATCTTACCGGGTGGTCGTTTATTGGAACAACGTAATAAGGCTCACGAATTGCTCACCAAAATC
CCTGGGATTAGCTGTGTGAAGCCAAAAGGGGCGATGTATATGTTCCCGAAAATTGATACGGAAATGTACGGTATCAAAGA
CGATCAGCAATTTGTTTACGATCTGCTTCAGCAGGAAAAAGTATTGTTGGTTCAAGGCTCAGGCTTTAACTGGCATAAAC
CAGACCACTTCCGTGTGGTGACATTGCCGTATGTTGATCAGCTGGAAGAAGCGATTGGACGATTAGCGAAGTTTTTGCAG
AGTTATCGTCAGGATTAA

Protein sequence :
MERFAKTDKLAHVRYDIRGPIHKEATRLEEEGHKILKLNIGNPAPFGFEAPAEILVDVIRNLPTAQGYCDSKGLYSARKA
IVQYYQLKGMRDLDVGDVYIGNGVSELITMSMQALLNDGDEILIPMPDYPLWTAATTLAGGKAVHYLCDEENEWFPDIED
IKSKITPRTKAILVINPNNPTGAVYSRQLLLDIVAIARGHNLIIFSDEIYEKIVYDGAVHHHLAPLAPDLLTVTYNGLSK
AYRVAGFRQGWMVLNGPKNQAKGFIEGLDMLASMRLCANTPMQHAIQTALGGYQSINEFILPGGRLLEQRNKAHELLTKI
PGISCVKPKGAMYMFPKIDTEMYGIKDDQQFVYDLLQQEKVLLVQGSGFNWHKPDHFRVVTLPYVDQLEEAIGRLAKFLQ
SYRQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 8e-124 64
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 8e-124 64
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 8e-124 64
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 8e-124 64