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Name : yfeD (HAPS_1100) Accession : YP_002475665.1 Strain : Haemophilus parasuis SH0165 Genome accession: NC_011852 Putative virulence/resistance : Virulence Product : chelated iron ABC transporter permease Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 1090552 - 1091391 bp Length : 840 bp Strand : + Note : COG:P;COG1108 DNA sequence : ATGGACGCACTCTATCAATGGTTTGCTGAACCGCTAGCTTTTCCTTTTATACAACAAGCCTTAGTTATCGGTGTTGTGGT TGCCCTAATCTGTGCCGTGTTGTCCTGCTATTTAGTGCTCAAAGGTTGGTCGCTAATGGGCGATGCCATCTCACACGCCG TATTACCAGGGATTGTGATTGCCTATCTGCTTGCCATTCCATTAGCAATCGGGGCTTTTGTTTCGGGCATTTTCTGTGCC GTTGCAGTGGGCTATCTCAAAGAAAATAGTCGCATTAAAGAAGATACGGTAATGGGGATCGTCTTTTCGGGAATGTTTGC GTTAGGTTTGGTGATGTTTGCCAAAGTCGAAACCGATCAACATCTAATGCACATCTTATTTGGCGATCTGCTTGGGATTA CCGACAATGAATTTTACCAAACTCTCGCCATTTCCTTAGTGGTATTATTCGTTATCTTAGTAAAACGCCGAGATTTCCTA CTATACTGCTTCGATGCCAGCCACGCTCGCACCGTTGGCTTTAATATCAAAGTGTTACATTACAGCTTACTGGTGCTATT GGCATTAGTGATTATTAGTGCAATGCAAGTGGTTGGCGTGATTTTAGTGGTGGCAATGTTGATTACCCCAGGGATCACAG GCTACACGCTTGCCAAACGCTTTGACCGAATGTTGCTAATCGCCATCTTCACTGCAGTAAATAGTGCTTTCTGGGGCGTG TTTTTAAGTTTCCATTTCGATGTCGCCACAGGACCTTGTATTGTGTTGTTGCAAGCGGTGGGATTTTTGGGGGCATTAGG AATCAATAAATTTAAAGTAATAGGCAAAAAAATTTATTAA Protein sequence : MDALYQWFAEPLAFPFIQQALVIGVVVALICAVLSCYLVLKGWSLMGDAISHAVLPGIVIAYLLAIPLAIGAFVSGIFCA VAVGYLKENSRIKEDTVMGIVFSGMFALGLVMFAKVETDQHLMHILFGDLLGITDNEFYQTLAISLVVLFVILVKRRDFL LYCFDASHARTVGFNIKVLHYSLLVLLALVIISAMQVVGVILVVAMLITPGITGYTLAKRFDRMLLIAIFTAVNSAFWGV FLSFHFDVATGPCIVLLQAVGFLGALGINKFKVIGKKIY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 3e-59 | 52 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 4e-59 | 52 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 9e-59 | 52 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 8e-59 | 52 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 8e-59 | 52 |
| ef0094 | AAM75297.1 | EF0094 | Not tested | Not named | Protein | 5e-39 | 42 |
| EF0576 | NP_814341.1 | cation ABC transporter permease | Not tested | Not named | Protein | 6e-39 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yfeD | YP_002475665.1 | chelated iron ABC transporter permease | BAC0442 | Protein | 2e-76 | 62 |
| yfeD | YP_002475665.1 | chelated iron ABC transporter permease | BAC0352 | Protein | 2e-59 | 52 |
| yfeD | YP_002475665.1 | chelated iron ABC transporter permease | BAC0441 | Protein | 5e-38 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yfeD | YP_002475665.1 | chelated iron ABC transporter permease | VFG0528 | Protein | 2e-59 | 52 |
