Gene Information

Name : yfeB (HAPS_1098)
Accession : YP_002475663.1
Strain : Haemophilus parasuis SH0165
Genome accession: NC_011852
Putative virulence/resistance : Virulence
Product : chelated iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1088915 - 1089676 bp
Length : 762 bp
Strand : +
Note : COG:P;COG1121

DNA sequence : 
ATGAACATTCTCCTGAGTTCTCTTTCTGTTTCCGATGTCACCGTTCGTTATAGCAACGGACACACGGCAATTCACGATGT
TACTTTTCGCCTTGACGGTGGCACAATCTGTGCATTACTTGGGGTGAACGGCAGTGGCAAATCAACCTTATTTAAAAGCA
TTATGGGCTTAGTCCAGCCAAAGGGAAATATTGAGCTATGCGGACTGCCTGTCAATCAAGCCTTAAAACGCAATCTTGTT
GCTTATGTGCCACAAAGTGAAGAAGTGGACTGGCAATTTCCCGTATCCGTTTATGATGTGGTAATGATGGGGCGTTATGG
CTATATGAATTTTCTGCGTATCCCTTCTGCTGTGGATAAGCAAAAAGTTGCTGAAGCAATGGAGCGGGTCAATATTGCTC
ATCTTGCGGATCGTCAAATCGGTGAGCTTTCAGGGGGACAGAAAAAACGAGTATTTTTGGCTCGTTCGCTTGCACAAGAG
AGCAAAATTATCTTACTTGACGAACCTTTCACTGGCGTGGACGTAAATACCGAAAATGCGATCATCGATCTACTCAAACA
GCTTCGGGATAGCGGTCACTTAATCCTTGTTTCTACCCATAATTTAGCCGCCGTACCAAGTTTTTGCGATCAAGCGGTAA
TGATTAATCGCACAGTGTTAGCAACAGGATCTATCGAAACGACATTCACCCCCGAAAATCTTGGACGAGTATTTGGCGGT
GTCTTGCGTTATCAGCAGTTACTCGGAGACCATAAGGAATAA

Protein sequence : 
MNILLSSLSVSDVTVRYSNGHTAIHDVTFRLDGGTICALLGVNGSGKSTLFKSIMGLVQPKGNIELCGLPVNQALKRNLV
AYVPQSEEVDWQFPVSVYDVVMMGRYGYMNFLRIPSAVDKQKVAEAMERVNIAHLADRQIGELSGGQKKRVFLARSLAQE
SKIILLDEPFTGVDVNTENAIIDLLKQLRDSGHLILVSTHNLAAVPSFCDQAVMINRTVLATGSIETTFTPENLGRVFGG
VLRYQQLLGDHKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 4e-70 63
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 5e-70 63
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 5e-70 63
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 5e-70 63
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-69 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeB YP_002475663.1 chelated iron ABC transporter ATP-binding protein BAC0440 Protein 4e-81 70
yfeB YP_002475663.1 chelated iron ABC transporter ATP-binding protein BAC0350 Protein 2e-70 63
yfeB YP_002475663.1 chelated iron ABC transporter ATP-binding protein BAC0400 Protein 1e-45 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeB YP_002475663.1 chelated iron ABC transporter ATP-binding protein VFG0526 Protein 2e-70 63