Gene Information

Name : yfeA (HAPS_1097)
Accession : YP_002475662.1
Strain : Haemophilus parasuis SH0165
Genome accession: NC_011852
Putative virulence/resistance : Virulence
Product : chelated iron ABC transporter periplasmic-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1087974 - 1088852 bp
Length : 879 bp
Strand : +
Note : COG:P;COG0803

DNA sequence : 
ATGAAAAAATTAGCAGCACTACTTAGTATGCTTTTTTTGGTAAGTAATCCACTTGCTGCCCAGCAGTTTAAAGTGGTCAC
CACATTCACTGTGATTCAAGACATTGCTCAAAATGTCGCAGGGGATAAGGCTGTGGTCGAGTCGATCACCAAACCAGGTG
CGGAAATCCACGATTATCAACCAACGCCACAGGATATTGTAAAAGCACAATCTGCGGATTTGGTGTTGTGGAACGGTATG
AACCTTGAAAGCTGGTTTGAGCGTTTCTTTGCTCAAGTGAAAGATAAACCTGCGGTTGTAGTAACGGAAGGTATTGAACC
GATTTCAATCTATGAAGGGCCTTACAAAGATAAACCAAACCCACACGCTTGGATGTCCACGAAAAATGCGTTGATTTATA
TTGAAAACATTCGCCAAGCCTTGGTGAAATACGATCCGGCAAATGCAGAAGCCTATAATGCGAATGCAAAGGCCTATGCC
GATAAGATAGTTGCCTTAGATCAGCCGTTGCGTGAGCGTTTGGCAAAAGTGCCTGAAGCACAACGTTGGTTAGTGACAAG
CGAAGGGGCGTTTAGCTATCTTGCTAGAGATTATGGCTTCAAAGAGTTATATCTTTGGGCGATTAACCAAGATGAACAAG
GCACGCCAAAACAGATCCGCAAAGTGATCGACCAAGTGCGTAAACATCAAATTCCGGTGGTATTTAGTGAAAGTACCATT
TCAGATAAACCGGCTAAACAAGTGGCGAAAGAGAGTAAAGCACGCTATGGCGGTGTGTTATATGTGGACTCTCTCTCAAC
AAAAGATGGCAAAGTACCAACCTATATTGATTTACTCAATGTGACGGTAAGTACAATTGTTGCTGGATTTGAAAAATAA

Protein sequence : 
MKKLAALLSMLFLVSNPLAAQQFKVVTTFTVIQDIAQNVAGDKAVVESITKPGAEIHDYQPTPQDIVKAQSADLVLWNGM
NLESWFERFFAQVKDKPAVVVTEGIEPISIYEGPYKDKPNPHAWMSTKNALIYIENIRQALVKYDPANAEAYNANAKAYA
DKIVALDQPLRERLAKVPEAQRWLVTSEGAFSYLARDYGFKELYLWAINQDEQGTPKQIRKVIDQVRKHQIPVVFSESTI
SDKPAKQVAKESKARYGGVLYVDSLSTKDGKVPTYIDLLNVTVSTIVAGFEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-87 65
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-87 65
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-87 65
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-87 65
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-87 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_002475662.1 chelated iron ABC transporter periplasmic-binding protein BAC0439 Protein 3e-92 74
yfeA YP_002475662.1 chelated iron ABC transporter periplasmic-binding protein BAC0349 Protein 1e-87 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_002475662.1 chelated iron ABC transporter periplasmic-binding protein VFG0525 Protein 1e-87 65