Gene Information

Name : hemC (HAPS_1006)
Accession : YP_002475573.1
Strain : Haemophilus parasuis SH0165
Genome accession: NC_011852
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 999578 - 1000507 bp
Length : 930 bp
Strand : -
Note : COG:H;COG0181

DNA sequence :
ATGAAAGAGATTTTACGCATTGCTACTCGTCAAAGTCCTCTAGCACTTTGGCAGGCAAATTTCGTTAAAGACGCATTAGA
ACAGCGTTTTCCACAATTATCAGTCGAGCTGGTTACAATGGTAACAAAAGGCGACATCATTTTAGATACACCGTTAGCAA
AAATCGGTGGAAAGGGCTTATTTGTCAAAGAGTTAGAGTTAGCCTTACTCGAAAACCGAGCAGATATTGCCGTCCATTCA
ATGAAAGATGTACCGATGACTTTTCCTGAAGGGCTAGGGCTTGCGGTCATTTGTGAGCGTGAAGATCCAAGAGATGCGTT
TGTATCTAATCACTATGCAAACCTTGAAGCCTTACCAGCAGGGGCTGTTGTGGGGACATCAAGCCTACGCCGTCAATGTC
AGCTAATGGCAAAATATCCGCATTTACAGATCAAATCCTTACGAGGCAACGTCGGAACTCGCCTGAGCAAATTAGATAAT
GGTGAATATGATGCGATTATTTTAGCTTCAGCAGGCTTAATCCGCTTAGGCTTAAGCGAACGTATCCGCACCTTTATCCC
TGTAGAAACATCACTGCCAGCCTGTGGGCAAGGGGCAGTTGGGATTGAAACCCGTTTGAATGACGAGCGAGTGTTAGCCT
ATCTTGCAGAATTAAATCACCAACCGACCGCTTACTGTGTACAAGCAGAGCGAGCAATGAACAGCCGTTTACAAGGCGGT
TGCCAAGTGCCTATCGGCGGTTTTGCAACATTAACAGGTGATGAAATTGAATTAAATGCCCTCGTCGGTTCGTTAGACGG
TTCAACCATTGTAAGAGCGTCAGCAAAAGGCAACATAAAAGAGGCAGAGAAATTAGGTGTTGAAGTGGCAGAAGCGTTAC
TTGCAAAAGGGGCTGATCACATTTTAAAAGCCGTTTATCAAAGCGAATAG

Protein sequence :
MKEILRIATRQSPLALWQANFVKDALEQRFPQLSVELVTMVTKGDIILDTPLAKIGGKGLFVKELELALLENRADIAVHS
MKDVPMTFPEGLGLAVICEREDPRDAFVSNHYANLEALPAGAVVGTSSLRRQCQLMAKYPHLQIKSLRGNVGTRLSKLDN
GEYDAIILASAGLIRLGLSERIRTFIPVETSLPACGQGAVGIETRLNDERVLAYLAELNHQPTAYCVQAERAMNSRLQGG
CQVPIGGFATLTGDEIELNALVGSLDGSTIVRASAKGNIKEAEKLGVEVAEALLAKGADHILKAVYQSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 7e-85 63
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 7e-85 63